Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB1Q9Y5F3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB1Q9Y5F3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB1Q9Y5F3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHB1Q9Y5F3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB1Q9Y5F3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB1Q9Y5F3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PCDHB1Q9Y5F3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB1Q9Y5F3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB1Q9Y5F3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PCDHB1Q9Y5F3 ABHD17AP1-201ENST00000358206 933 ntBASIC21.1■□□□□ 0.97
PCDHB1Q9Y5F3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDHB1Q9Y5F3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PCDHB1Q9Y5F3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHB1Q9Y5F3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB1Q9Y5F3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDHB1Q9Y5F3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB1Q9Y5F3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB1Q9Y5F3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB1Q9Y5F3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB1Q9Y5F3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHB1Q9Y5F3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHB1Q9Y5F3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHB1Q9Y5F3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHB1Q9Y5F3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHB1Q9Y5F3 AL109923.1-201ENST00000618799 583 ntBASIC21.09■□□□□ 0.97
PCDHB1Q9Y5F3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB1Q9Y5F3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHB1Q9Y5F3 AC003102.1-202ENST00000563394 1796 ntBASIC21.09■□□□□ 0.97
PCDHB1Q9Y5F3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PCDHB1Q9Y5F3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PCDHB1Q9Y5F3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PCDHB1Q9Y5F3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB1Q9Y5F3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB1Q9Y5F3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB1Q9Y5F3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB1Q9Y5F3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB1Q9Y5F3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB1Q9Y5F3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHB1Q9Y5F3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB1Q9Y5F3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.08■□□□□ 0.96
PCDHB1Q9Y5F3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB1Q9Y5F3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB1Q9Y5F3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB1Q9Y5F3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PCDHB1Q9Y5F3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB1Q9Y5F3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB1Q9Y5F3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB1Q9Y5F3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHB1Q9Y5F3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB1Q9Y5F3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHB1Q9Y5F3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB1Q9Y5F3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB1Q9Y5F3 AC005224.4-201ENST00000583262 1652 ntBASIC21.06■□□□□ 0.96
PCDHB1Q9Y5F3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB1Q9Y5F3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB1Q9Y5F3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB1Q9Y5F3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PCDHB1Q9Y5F3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHB1Q9Y5F3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDHB1Q9Y5F3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB1Q9Y5F3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDHB1Q9Y5F3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB1Q9Y5F3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PCDHB1Q9Y5F3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB1Q9Y5F3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB1Q9Y5F3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHB1Q9Y5F3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB1Q9Y5F3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB1Q9Y5F3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB1Q9Y5F3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB1Q9Y5F3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHB1Q9Y5F3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
PCDHB1Q9Y5F3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB1Q9Y5F3 AC055733.4-201ENST00000638462 1354 ntBASIC21.05■□□□□ 0.96
PCDHB1Q9Y5F3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
PCDHB1Q9Y5F3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PCDHB1Q9Y5F3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHB1Q9Y5F3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHB1Q9Y5F3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB1Q9Y5F3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PCDHB1Q9Y5F3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHB1Q9Y5F3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDHB1Q9Y5F3 KRT19P1-201ENST00000405746 1186 ntBASIC21.04■□□□□ 0.96
PCDHB1Q9Y5F3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB1Q9Y5F3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB1Q9Y5F3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDHB1Q9Y5F3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB1Q9Y5F3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB1Q9Y5F3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB1Q9Y5F3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB1Q9Y5F3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB1Q9Y5F3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB1Q9Y5F3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
PCDHB1Q9Y5F3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB1Q9Y5F3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PCDHB1Q9Y5F3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB1Q9Y5F3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB1Q9Y5F3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB1Q9Y5F3 MIR663A-201ENST00000385250 93 ntBASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms