Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERGIC3Q9Y282 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ERGIC3Q9Y282 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ERGIC3Q9Y282 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERGIC3Q9Y282 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERGIC3Q9Y282 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERGIC3Q9Y282 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERGIC3Q9Y282 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERGIC3Q9Y282 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ERGIC3Q9Y282 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.18■□□□□ 0.66
ERGIC3Q9Y282 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.18■□□□□ 0.66
ERGIC3Q9Y282 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ERGIC3Q9Y282 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ERGIC3Q9Y282 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ERGIC3Q9Y282 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERGIC3Q9Y282 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERGIC3Q9Y282 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ERGIC3Q9Y282 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.18■□□□□ 0.66
ERGIC3Q9Y282 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ERGIC3Q9Y282 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ERGIC3Q9Y282 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERGIC3Q9Y282 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERGIC3Q9Y282 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.17■□□□□ 0.66
ERGIC3Q9Y282 PVT1_1.1-201ENST00000615125 194 ntBASIC19.17■□□□□ 0.66
ERGIC3Q9Y282 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ERGIC3Q9Y282 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.17■□□□□ 0.66
ERGIC3Q9Y282 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ERGIC3Q9Y282 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.17■□□□□ 0.66
ERGIC3Q9Y282 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ERGIC3Q9Y282 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ERGIC3Q9Y282 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ERGIC3Q9Y282 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERGIC3Q9Y282 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERGIC3Q9Y282 AC026471.6-201ENST00000622954 1905 ntBASIC19.16■□□□□ 0.66
ERGIC3Q9Y282 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERGIC3Q9Y282 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
ERGIC3Q9Y282 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERGIC3Q9Y282 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.16■□□□□ 0.66
ERGIC3Q9Y282 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
ERGIC3Q9Y282 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ERGIC3Q9Y282 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERGIC3Q9Y282 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ERGIC3Q9Y282 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.16■□□□□ 0.66
ERGIC3Q9Y282 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ERGIC3Q9Y282 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ERGIC3Q9Y282 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ERGIC3Q9Y282 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.15■□□□□ 0.66
ERGIC3Q9Y282 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERGIC3Q9Y282 C17orf82-201ENST00000623772 1530 ntBASIC19.15■□□□□ 0.66
ERGIC3Q9Y282 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERGIC3Q9Y282 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERGIC3Q9Y282 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.15■□□□□ 0.66
ERGIC3Q9Y282 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.15■□□□□ 0.66
ERGIC3Q9Y282 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERGIC3Q9Y282 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERGIC3Q9Y282 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERGIC3Q9Y282 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.15■□□□□ 0.66
ERGIC3Q9Y282 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.15■□□□□ 0.66
ERGIC3Q9Y282 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERGIC3Q9Y282 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ERGIC3Q9Y282 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ERGIC3Q9Y282 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.15■□□□□ 0.66
ERGIC3Q9Y282 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.15■□□□□ 0.66
ERGIC3Q9Y282 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ERGIC3Q9Y282 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.14■□□□□ 0.66
ERGIC3Q9Y282 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.14■□□□□ 0.65
ERGIC3Q9Y282 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.14■□□□□ 0.65
ERGIC3Q9Y282 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERGIC3Q9Y282 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ERGIC3Q9Y282 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERGIC3Q9Y282 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERGIC3Q9Y282 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERGIC3Q9Y282 ABHD17AP5-201ENST00000580133 923 ntBASIC19.14■□□□□ 0.65
ERGIC3Q9Y282 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.14■□□□□ 0.65
ERGIC3Q9Y282 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERGIC3Q9Y282 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERGIC3Q9Y282 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ERGIC3Q9Y282 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.13■□□□□ 0.65
ERGIC3Q9Y282 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.13■□□□□ 0.65
ERGIC3Q9Y282 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.13■□□□□ 0.65
ERGIC3Q9Y282 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERGIC3Q9Y282 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERGIC3Q9Y282 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ERGIC3Q9Y282 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERGIC3Q9Y282 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERGIC3Q9Y282 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
ERGIC3Q9Y282 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERGIC3Q9Y282 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ERGIC3Q9Y282 AC026471.1-201ENST00000564629 3026 ntBASIC19.13■□□□□ 0.65
ERGIC3Q9Y282 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms