Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPS3Q9UNS2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPS3Q9UNS2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.75■□□□□ 0.59
COPS3Q9UNS2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPS3Q9UNS2 LINC01521-201ENST00000504184 1943 ntBASIC18.74■□□□□ 0.59
COPS3Q9UNS2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPS3Q9UNS2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPS3Q9UNS2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.74■□□□□ 0.59
COPS3Q9UNS2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.74■□□□□ 0.59
COPS3Q9UNS2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPS3Q9UNS2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
COPS3Q9UNS2 AL356441.2-201ENST00000443009 864 ntBASIC18.74■□□□□ 0.59
COPS3Q9UNS2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.74■□□□□ 0.59
COPS3Q9UNS2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPS3Q9UNS2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPS3Q9UNS2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.74■□□□□ 0.59
COPS3Q9UNS2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPS3Q9UNS2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPS3Q9UNS2 AP006587.3-201ENST00000525742 1516 ntBASIC18.74■□□□□ 0.59
COPS3Q9UNS2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COPS3Q9UNS2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COPS3Q9UNS2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
COPS3Q9UNS2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COPS3Q9UNS2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.73■□□□□ 0.59
COPS3Q9UNS2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
COPS3Q9UNS2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COPS3Q9UNS2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COPS3Q9UNS2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.73■□□□□ 0.59
COPS3Q9UNS2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COPS3Q9UNS2 AC011298.3-201ENST00000615796 283 ntBASIC18.73■□□□□ 0.59
COPS3Q9UNS2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
COPS3Q9UNS2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COPS3Q9UNS2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COPS3Q9UNS2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COPS3Q9UNS2 LINC01006-201ENST00000333319 2292 ntBASIC18.72■□□□□ 0.59
COPS3Q9UNS2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
COPS3Q9UNS2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 DUX4L19-201ENST00000557448 1267 ntBASIC18.71■□□□□ 0.59
COPS3Q9UNS2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COPS3Q9UNS2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COPS3Q9UNS2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
COPS3Q9UNS2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
COPS3Q9UNS2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COPS3Q9UNS2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COPS3Q9UNS2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
COPS3Q9UNS2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COPS3Q9UNS2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
COPS3Q9UNS2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COPS3Q9UNS2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.7■□□□□ 0.58
COPS3Q9UNS2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.7■□□□□ 0.58
COPS3Q9UNS2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COPS3Q9UNS2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.7■□□□□ 0.58
COPS3Q9UNS2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COPS3Q9UNS2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COPS3Q9UNS2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
COPS3Q9UNS2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.69■□□□□ 0.58
COPS3Q9UNS2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COPS3Q9UNS2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COPS3Q9UNS2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.69■□□□□ 0.58
COPS3Q9UNS2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.69■□□□□ 0.58
COPS3Q9UNS2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.69■□□□□ 0.58
COPS3Q9UNS2 AC131281.2-201ENST00000520478 145 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms