Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 LONRF2P2-201ENST00000439212 571 ntBASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN2Q9UHD9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 YBX1P4-201ENST00000392794 808 ntBASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN2Q9UHD9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
UBQLN2Q9UHD9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 AC144652.1-201ENST00000609974 1624 ntBASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 AL353803.4-201ENST00000565882 1934 ntBASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN2Q9UHD9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN2Q9UHD9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN2Q9UHD9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN2Q9UHD9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.69■□□□□ 0.42
UBQLN2Q9UHD9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN2Q9UHD9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN2Q9UHD9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.69■□□□□ 0.42
UBQLN2Q9UHD9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN2Q9UHD9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN2Q9UHD9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
UBQLN2Q9UHD9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN2Q9UHD9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN2Q9UHD9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN2Q9UHD9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
UBQLN2Q9UHD9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
UBQLN2Q9UHD9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN2Q9UHD9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 AP005212.1-201ENST00000581547 1997 ntBASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN2Q9UHD9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms