Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KCNIP1Q9NZI2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KCNIP1Q9NZI2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.65■□□□□ 0.42
KCNIP1Q9NZI2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KCNIP1Q9NZI2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
KCNIP1Q9NZI2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
KCNIP1Q9NZI2 AP006587.3-201ENST00000525742 1516 ntBASIC17.65■□□□□ 0.42
KCNIP1Q9NZI2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
KCNIP1Q9NZI2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNIP1Q9NZI2 AC003102.1-202ENST00000563394 1796 ntBASIC17.65■□□□□ 0.42
KCNIP1Q9NZI2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
KCNIP1Q9NZI2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNIP1Q9NZI2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
KCNIP1Q9NZI2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.65■□□□□ 0.42
KCNIP1Q9NZI2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNIP1Q9NZI2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNIP1Q9NZI2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.65■□□□□ 0.42
KCNIP1Q9NZI2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
KCNIP1Q9NZI2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
KCNIP1Q9NZI2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNIP1Q9NZI2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNIP1Q9NZI2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNIP1Q9NZI2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNIP1Q9NZI2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNIP1Q9NZI2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNIP1Q9NZI2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNIP1Q9NZI2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.64■□□□□ 0.41
KCNIP1Q9NZI2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.64■□□□□ 0.41
KCNIP1Q9NZI2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.64■□□□□ 0.41
KCNIP1Q9NZI2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNIP1Q9NZI2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNIP1Q9NZI2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNIP1Q9NZI2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNIP1Q9NZI2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP1Q9NZI2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP1Q9NZI2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP1Q9NZI2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.63■□□□□ 0.41
KCNIP1Q9NZI2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP1Q9NZI2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.63■□□□□ 0.41
KCNIP1Q9NZI2 IGHV3-19-201ENST00000521488 291 ntBASIC17.63■□□□□ 0.41
KCNIP1Q9NZI2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
KCNIP1Q9NZI2 SMUG1P1-201ENST00000590640 811 ntBASIC17.63■□□□□ 0.41
KCNIP1Q9NZI2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.63■□□□□ 0.41
KCNIP1Q9NZI2 AC008764.7-201ENST00000593779 1081 ntBASIC17.63■□□□□ 0.41
KCNIP1Q9NZI2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP1Q9NZI2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
KCNIP1Q9NZI2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP1Q9NZI2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP1Q9NZI2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNIP1Q9NZI2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
KCNIP1Q9NZI2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNIP1Q9NZI2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.62■□□□□ 0.41
KCNIP1Q9NZI2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNIP1Q9NZI2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.62■□□□□ 0.41
KCNIP1Q9NZI2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNIP1Q9NZI2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNIP1Q9NZI2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNIP1Q9NZI2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
KCNIP1Q9NZI2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KCNIP1Q9NZI2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
KCNIP1Q9NZI2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
KCNIP1Q9NZI2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNIP1Q9NZI2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KCNIP1Q9NZI2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.62■□□□□ 0.41
KCNIP1Q9NZI2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.62■□□□□ 0.41
KCNIP1Q9NZI2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
KCNIP1Q9NZI2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 AC133561.4-201ENST00000566112 224 ntBASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNIP1Q9NZI2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 PBX2P1-201ENST00000493219 1291 ntBASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.6■□□□□ 0.41
KCNIP1Q9NZI2 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms