Protein–RNA interactions for Protein: Q9NRG0

CHRAC1, Chromatin accessibility complex protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1Q9NRG0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHRAC1Q9NRG0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.22■□□□□ 0.99
CHRAC1Q9NRG0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.22■□□□□ 0.99
CHRAC1Q9NRG0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHRAC1Q9NRG0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRAC1Q9NRG0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.22■□□□□ 0.99
CHRAC1Q9NRG0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHRAC1Q9NRG0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.22■□□□□ 0.99
CHRAC1Q9NRG0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.22■□□□□ 0.99
CHRAC1Q9NRG0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 AL049796.1-201ENST00000565336 1766 ntBASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 AL354811.1-201ENST00000610286 706 ntBASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CHRAC1Q9NRG0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
CHRAC1Q9NRG0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHRAC1Q9NRG0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHRAC1Q9NRG0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHRAC1Q9NRG0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.2■□□□□ 0.98
CHRAC1Q9NRG0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHRAC1Q9NRG0 MIR638-201ENST00000385237 100 ntBASIC21.2■□□□□ 0.98
CHRAC1Q9NRG0 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.2■□□□□ 0.98
CHRAC1Q9NRG0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.2■□□□□ 0.98
CHRAC1Q9NRG0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHRAC1Q9NRG0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.2■□□□□ 0.98
CHRAC1Q9NRG0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.2■□□□□ 0.98
CHRAC1Q9NRG0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHRAC1Q9NRG0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHRAC1Q9NRG0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHRAC1Q9NRG0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHRAC1Q9NRG0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 AC105265.2-201ENST00000467189 838 ntBASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 MIR6084-201ENST00000622012 110 ntBASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHRAC1Q9NRG0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHRAC1Q9NRG0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHRAC1Q9NRG0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHRAC1Q9NRG0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHRAC1Q9NRG0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.18■□□□□ 0.98
CHRAC1Q9NRG0 TPRG1LP1-201ENST00000598702 760 ntBASIC21.18■□□□□ 0.98
CHRAC1Q9NRG0 AL358852.1-201ENST00000623174 1268 ntBASIC21.18■□□□□ 0.98
CHRAC1Q9NRG0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CHRAC1Q9NRG0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHRAC1Q9NRG0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHRAC1Q9NRG0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHRAC1Q9NRG0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHRAC1Q9NRG0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRAC1Q9NRG0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CHRAC1Q9NRG0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRAC1Q9NRG0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.17■□□□□ 0.98
CHRAC1Q9NRG0 IRS3P-201ENST00000223076 1006 ntBASIC21.17■□□□□ 0.98
CHRAC1Q9NRG0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHRAC1Q9NRG0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.17■□□□□ 0.98
CHRAC1Q9NRG0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHRAC1Q9NRG0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.17■□□□□ 0.98
CHRAC1Q9NRG0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CHRAC1Q9NRG0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRAC1Q9NRG0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRAC1Q9NRG0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRAC1Q9NRG0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.17■□□□□ 0.98
CHRAC1Q9NRG0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHRAC1Q9NRG0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms