Protein–RNA interactions for Protein: Q9HAE3

EFCAB1, EF-hand calcium-binding domain-containing protein 1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB1Q9HAE3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EFCAB1Q9HAE3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EFCAB1Q9HAE3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EFCAB1Q9HAE3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
EFCAB1Q9HAE3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EFCAB1Q9HAE3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
EFCAB1Q9HAE3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
EFCAB1Q9HAE3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EFCAB1Q9HAE3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EFCAB1Q9HAE3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EFCAB1Q9HAE3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EFCAB1Q9HAE3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
EFCAB1Q9HAE3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.23■□□□□ 0.83
EFCAB1Q9HAE3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EFCAB1Q9HAE3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
EFCAB1Q9HAE3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EFCAB1Q9HAE3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EFCAB1Q9HAE3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EFCAB1Q9HAE3 AC012354.3-201ENST00000623734 483 ntBASIC20.23■□□□□ 0.83
EFCAB1Q9HAE3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.23■□□□□ 0.83
EFCAB1Q9HAE3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EFCAB1Q9HAE3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.23■□□□□ 0.83
EFCAB1Q9HAE3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 AL033527.3-201ENST00000566366 1196 ntBASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 AL117332.1-201ENST00000622628 974 ntBASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
EFCAB1Q9HAE3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 KRT125P-201ENST00000546827 989 ntBASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.21■□□□□ 0.83
EFCAB1Q9HAE3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 AC010997.5-201ENST00000609182 354 ntBASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 pRNA.6-201ENST00000610482 90 ntBASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 pRNA.5-201ENST00000612139 90 ntBASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 pRNA.11-201ENST00000618423 90 ntBASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 pRNA.13-201ENST00000619112 90 ntBASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
EFCAB1Q9HAE3 PLK5-205ENST00000642079 1969 ntBASIC20.19■□□□□ 0.82
EFCAB1Q9HAE3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EFCAB1Q9HAE3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.19■□□□□ 0.82
EFCAB1Q9HAE3 AC010141.3-201ENST00000456659 717 ntBASIC20.19■□□□□ 0.82
EFCAB1Q9HAE3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.19■□□□□ 0.82
EFCAB1Q9HAE3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.19■□□□□ 0.82
EFCAB1Q9HAE3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms