Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.13■■□□□ 1.29
RNF39Q9H2S5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.13■■□□□ 1.29
RNF39Q9H2S5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.13■■□□□ 1.29
RNF39Q9H2S5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.12■■□□□ 1.29
RNF39Q9H2S5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF39Q9H2S5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF39Q9H2S5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF39Q9H2S5 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC23.12■■□□□ 1.29
RNF39Q9H2S5 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC23.12■■□□□ 1.29
RNF39Q9H2S5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.12■■□□□ 1.29
RNF39Q9H2S5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.12■■□□□ 1.29
RNF39Q9H2S5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RNF39Q9H2S5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.12■■□□□ 1.29
RNF39Q9H2S5 AC097520.1-201ENST00000624435 385 ntBASIC23.12■■□□□ 1.29
RNF39Q9H2S5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RNF39Q9H2S5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF39Q9H2S5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RNF39Q9H2S5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.12■■□□□ 1.29
RNF39Q9H2S5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF39Q9H2S5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RNF39Q9H2S5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.11■■□□□ 1.29
RNF39Q9H2S5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF39Q9H2S5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF39Q9H2S5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF39Q9H2S5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.11■■□□□ 1.29
RNF39Q9H2S5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF39Q9H2S5 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC23.11■■□□□ 1.29
RNF39Q9H2S5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.11■■□□□ 1.29
RNF39Q9H2S5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.11■■□□□ 1.29
RNF39Q9H2S5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.11■■□□□ 1.29
RNF39Q9H2S5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
RNF39Q9H2S5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.11■■□□□ 1.29
RNF39Q9H2S5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RNF39Q9H2S5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RNF39Q9H2S5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RNF39Q9H2S5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RNF39Q9H2S5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.1■■□□□ 1.29
RNF39Q9H2S5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.1■■□□□ 1.29
RNF39Q9H2S5 MIR663A-201ENST00000385250 93 ntBASIC23.1■■□□□ 1.29
RNF39Q9H2S5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
RNF39Q9H2S5 AC006970.2-201ENST00000450065 779 ntBASIC23.1■■□□□ 1.29
RNF39Q9H2S5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.1■■□□□ 1.29
RNF39Q9H2S5 SLC7A5P2-201ENST00000553010 536 ntBASIC23.1■■□□□ 1.29
RNF39Q9H2S5 AL096869.2-202ENST00000557007 1237 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RNF39Q9H2S5 AC087762.1-201ENST00000559755 643 ntTSL 3 BASIC23.1■■□□□ 1.29
RNF39Q9H2S5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RNF39Q9H2S5 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC23.1■■□□□ 1.29
RNF39Q9H2S5 AC053503.5-201ENST00000601508 636 ntBASIC23.1■■□□□ 1.29
RNF39Q9H2S5 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.1■■□□□ 1.29
RNF39Q9H2S5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RNF39Q9H2S5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RNF39Q9H2S5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
RNF39Q9H2S5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RNF39Q9H2S5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RNF39Q9H2S5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
RNF39Q9H2S5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
RNF39Q9H2S5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF39Q9H2S5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.09■■□□□ 1.29
RNF39Q9H2S5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RNF39Q9H2S5 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF39Q9H2S5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF39Q9H2S5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RNF39Q9H2S5 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC23.09■■□□□ 1.29
RNF39Q9H2S5 AL050303.2-201ENST00000619798 666 ntBASIC23.09■■□□□ 1.29
RNF39Q9H2S5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.09■■□□□ 1.29
RNF39Q9H2S5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.09■■□□□ 1.29
RNF39Q9H2S5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.09■■□□□ 1.29
RNF39Q9H2S5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF39Q9H2S5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF39Q9H2S5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF39Q9H2S5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RNF39Q9H2S5 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC23.08■■□□□ 1.29
RNF39Q9H2S5 NCF1B-203ENST00000435988 1254 ntBASIC23.08■■□□□ 1.29
RNF39Q9H2S5 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC23.08■■□□□ 1.29
RNF39Q9H2S5 MTND2P3-201ENST00000452458 470 ntBASIC23.08■■□□□ 1.29
RNF39Q9H2S5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF39Q9H2S5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.08■■□□□ 1.29
RNF39Q9H2S5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.08■■□□□ 1.29
RNF39Q9H2S5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC23.08■■□□□ 1.29
RNF39Q9H2S5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF39Q9H2S5 AC104771.1-201ENST00000603335 964 ntBASIC23.08■■□□□ 1.29
RNF39Q9H2S5 AC144521.1-201ENST00000607148 956 ntBASIC23.08■■□□□ 1.29
RNF39Q9H2S5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.08■■□□□ 1.29
RNF39Q9H2S5 AP003108.4-201ENST00000623917 878 ntBASIC23.08■■□□□ 1.29
RNF39Q9H2S5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.08■■□□□ 1.29
RNF39Q9H2S5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF39Q9H2S5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.08■■□□□ 1.29
RNF39Q9H2S5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.08■■□□□ 1.29
RNF39Q9H2S5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.07■■□□□ 1.28
RNF39Q9H2S5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF39Q9H2S5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF39Q9H2S5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RNF39Q9H2S5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RNF39Q9H2S5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RNF39Q9H2S5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RNF39Q9H2S5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.07■■□□□ 1.28
RNF39Q9H2S5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.07■■□□□ 1.28
RNF39Q9H2S5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF39Q9H2S5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF39Q9H2S5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms