Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CYSTM1Q9H1C7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC12.37□□□□□ -0.43
CYSTM1Q9H1C7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CYSTM1Q9H1C7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CYSTM1Q9H1C7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CYSTM1Q9H1C7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CYSTM1Q9H1C7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC12.36□□□□□ -0.43
CYSTM1Q9H1C7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CYSTM1Q9H1C7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CYSTM1Q9H1C7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
CYSTM1Q9H1C7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC12.36□□□□□ -0.43
CYSTM1Q9H1C7 AC015813.7-201ENST00000623294 581 ntBASIC12.36□□□□□ -0.43
CYSTM1Q9H1C7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CYSTM1Q9H1C7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CYSTM1Q9H1C7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CYSTM1Q9H1C7 AC087742.1-201ENST00000575880 1738 ntBASIC12.36□□□□□ -0.43
CYSTM1Q9H1C7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CYSTM1Q9H1C7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
CYSTM1Q9H1C7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC12.36□□□□□ -0.43
CYSTM1Q9H1C7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CYSTM1Q9H1C7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 PRORSD1P-202ENST00000563365 2154 ntBASIC12.35□□□□□ -0.43
CYSTM1Q9H1C7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CYSTM1Q9H1C7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
CYSTM1Q9H1C7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms