Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ALX4Q9H161 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALX4Q9H161 AC006128.1-201ENST00000624704 1661 ntBASIC17.77■□□□□ 0.44
ALX4Q9H161 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ALX4Q9H161 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ALX4Q9H161 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALX4Q9H161 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALX4Q9H161 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.77■□□□□ 0.44
ALX4Q9H161 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.77■□□□□ 0.44
ALX4Q9H161 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALX4Q9H161 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALX4Q9H161 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ALX4Q9H161 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.77■□□□□ 0.44
ALX4Q9H161 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.77■□□□□ 0.44
ALX4Q9H161 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.77■□□□□ 0.44
ALX4Q9H161 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.77■□□□□ 0.44
ALX4Q9H161 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ALX4Q9H161 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
ALX4Q9H161 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ALX4Q9H161 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ALX4Q9H161 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ALX4Q9H161 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
ALX4Q9H161 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
ALX4Q9H161 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ALX4Q9H161 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ALX4Q9H161 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.76■□□□□ 0.43
ALX4Q9H161 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALX4Q9H161 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.76■□□□□ 0.43
ALX4Q9H161 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALX4Q9H161 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ALX4Q9H161 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ALX4Q9H161 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ALX4Q9H161 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.76■□□□□ 0.43
ALX4Q9H161 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.76■□□□□ 0.43
ALX4Q9H161 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ALX4Q9H161 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.76■□□□□ 0.43
ALX4Q9H161 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.76■□□□□ 0.43
ALX4Q9H161 AFG3L1P-217ENST00000557444 2447 ntBASIC17.76■□□□□ 0.43
ALX4Q9H161 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALX4Q9H161 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALX4Q9H161 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ALX4Q9H161 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALX4Q9H161 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALX4Q9H161 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALX4Q9H161 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALX4Q9H161 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALX4Q9H161 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.75■□□□□ 0.43
ALX4Q9H161 AC079089.2-201ENST00000531211 1277 ntBASIC17.75■□□□□ 0.43
ALX4Q9H161 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.75■□□□□ 0.43
ALX4Q9H161 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALX4Q9H161 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
ALX4Q9H161 MIR6724-1-201ENST00000616420 92 ntBASIC17.75■□□□□ 0.43
ALX4Q9H161 MIR6724-2-201ENST00000616483 92 ntBASIC17.75■□□□□ 0.43
ALX4Q9H161 MIR6724-4-201ENST00000617390 92 ntBASIC17.75■□□□□ 0.43
ALX4Q9H161 MIR6724-3-201ENST00000622482 92 ntBASIC17.75■□□□□ 0.43
ALX4Q9H161 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALX4Q9H161 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ALX4Q9H161 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ALX4Q9H161 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALX4Q9H161 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
ALX4Q9H161 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.75■□□□□ 0.43
ALX4Q9H161 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALX4Q9H161 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ALX4Q9H161 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALX4Q9H161 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALX4Q9H161 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.74■□□□□ 0.43
ALX4Q9H161 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ALX4Q9H161 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALX4Q9H161 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ALX4Q9H161 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ALX4Q9H161 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.74■□□□□ 0.43
ALX4Q9H161 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.74■□□□□ 0.43
ALX4Q9H161 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.74■□□□□ 0.43
ALX4Q9H161 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ALX4Q9H161 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALX4Q9H161 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALX4Q9H161 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.74■□□□□ 0.43
ALX4Q9H161 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.74■□□□□ 0.43
ALX4Q9H161 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.74■□□□□ 0.43
ALX4Q9H161 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.74■□□□□ 0.43
ALX4Q9H161 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALX4Q9H161 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ALX4Q9H161 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALX4Q9H161 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALX4Q9H161 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALX4Q9H161 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.73■□□□□ 0.43
ALX4Q9H161 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.73■□□□□ 0.43
ALX4Q9H161 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ALX4Q9H161 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ALX4Q9H161 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALX4Q9H161 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALX4Q9H161 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ALX4Q9H161 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.73■□□□□ 0.43
ALX4Q9H161 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALX4Q9H161 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ALX4Q9H161 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.73■□□□□ 0.43
ALX4Q9H161 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.73■□□□□ 0.43
ALX4Q9H161 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALX4Q9H161 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ALX4Q9H161 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms