Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 AL157384.1-201ENST00000445995 2473 ntBASIC19.42■□□□□ 0.7
POLR2J2Q9GZM3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J2Q9GZM3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J2Q9GZM3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J2Q9GZM3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR2J2Q9GZM3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J2Q9GZM3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J2Q9GZM3 AC233992.3-201ENST00000607491 485 ntBASIC19.42■□□□□ 0.7
POLR2J2Q9GZM3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J2Q9GZM3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J2Q9GZM3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR2J2Q9GZM3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J2Q9GZM3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J2Q9GZM3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR2J2Q9GZM3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 SMUG1P1-201ENST00000590640 811 ntBASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 AF106564.1-201ENST00000607058 2553 ntBASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J2Q9GZM3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 MIR4767-201ENST00000582827 78 ntBASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
POLR2J2Q9GZM3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
POLR2J2Q9GZM3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
POLR2J2Q9GZM3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
POLR2J2Q9GZM3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
POLR2J2Q9GZM3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
POLR2J2Q9GZM3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
POLR2J2Q9GZM3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
POLR2J2Q9GZM3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2J2Q9GZM3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2J2Q9GZM3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2J2Q9GZM3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.39■□□□□ 0.69
POLR2J2Q9GZM3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.39■□□□□ 0.69
POLR2J2Q9GZM3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
POLR2J2Q9GZM3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
POLR2J2Q9GZM3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.39■□□□□ 0.69
POLR2J2Q9GZM3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
POLR2J2Q9GZM3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2J2Q9GZM3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.39■□□□□ 0.69
POLR2J2Q9GZM3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
POLR2J2Q9GZM3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2J2Q9GZM3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J2Q9GZM3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J2Q9GZM3 UNC93B3-201ENST00000308076 687 ntBASIC19.38■□□□□ 0.69
POLR2J2Q9GZM3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J2Q9GZM3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J2Q9GZM3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J2Q9GZM3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J2Q9GZM3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.38■□□□□ 0.69
POLR2J2Q9GZM3 AC092667.1-201ENST00000434301 2586 ntBASIC19.38■□□□□ 0.69
POLR2J2Q9GZM3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J2Q9GZM3 IGHV3-19-201ENST00000521488 291 ntBASIC19.38■□□□□ 0.69
POLR2J2Q9GZM3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J2Q9GZM3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J2Q9GZM3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
POLR2J2Q9GZM3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
POLR2J2Q9GZM3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
POLR2J2Q9GZM3 LINC01521-201ENST00000504184 1943 ntBASIC19.37■□□□□ 0.69
POLR2J2Q9GZM3 AL049796.1-201ENST00000565336 1766 ntBASIC19.37■□□□□ 0.69
POLR2J2Q9GZM3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms