Protein–RNA interactions for Protein: Q96H20

SNF8, Vacuolar-sorting protein SNF8, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8Q96H20 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SNF8Q96H20 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.65■■□□□ 1.06
SNF8Q96H20 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.65■■□□□ 1.06
SNF8Q96H20 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNF8Q96H20 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNF8Q96H20 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNF8Q96H20 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNF8Q96H20 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SNF8Q96H20 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNF8Q96H20 SLC47A1P1-202ENST00000449666 945 ntBASIC21.65■■□□□ 1.06
SNF8Q96H20 AC136469.2-201ENST00000623944 1028 ntBASIC21.65■■□□□ 1.06
SNF8Q96H20 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.65■■□□□ 1.06
SNF8Q96H20 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNF8Q96H20 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNF8Q96H20 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNF8Q96H20 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
SNF8Q96H20 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNF8Q96H20 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.64■■□□□ 1.06
SNF8Q96H20 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.64■■□□□ 1.06
SNF8Q96H20 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.64■■□□□ 1.05
SNF8Q96H20 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNF8Q96H20 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.64■■□□□ 1.05
SNF8Q96H20 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.64■■□□□ 1.05
SNF8Q96H20 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.64■■□□□ 1.05
SNF8Q96H20 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.64■■□□□ 1.05
SNF8Q96H20 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
SNF8Q96H20 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SNF8Q96H20 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNF8Q96H20 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNF8Q96H20 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.64■■□□□ 1.05
SNF8Q96H20 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNF8Q96H20 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.63■■□□□ 1.05
SNF8Q96H20 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNF8Q96H20 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNF8Q96H20 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNF8Q96H20 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SNF8Q96H20 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SNF8Q96H20 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SNF8Q96H20 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SNF8Q96H20 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SNF8Q96H20 DUX4L19-201ENST00000557448 1267 ntBASIC21.63■■□□□ 1.05
SNF8Q96H20 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.63■■□□□ 1.05
SNF8Q96H20 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.63■■□□□ 1.05
SNF8Q96H20 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.63■■□□□ 1.05
SNF8Q96H20 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SNF8Q96H20 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNF8Q96H20 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SNF8Q96H20 AC006128.1-201ENST00000624704 1661 ntBASIC21.63■■□□□ 1.05
SNF8Q96H20 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.63■■□□□ 1.05
SNF8Q96H20 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SNF8Q96H20 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNF8Q96H20 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.62■■□□□ 1.05
SNF8Q96H20 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SNF8Q96H20 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.62■■□□□ 1.05
SNF8Q96H20 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SNF8Q96H20 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SNF8Q96H20 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SNF8Q96H20 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.62■■□□□ 1.05
SNF8Q96H20 AC011298.3-201ENST00000615796 283 ntBASIC21.62■■□□□ 1.05
SNF8Q96H20 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNF8Q96H20 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNF8Q96H20 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SNF8Q96H20 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.62■■□□□ 1.05
SNF8Q96H20 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.62■■□□□ 1.05
SNF8Q96H20 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SNF8Q96H20 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
SNF8Q96H20 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.61■■□□□ 1.05
SNF8Q96H20 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.61■■□□□ 1.05
SNF8Q96H20 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.61■■□□□ 1.05
SNF8Q96H20 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SNF8Q96H20 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNF8Q96H20 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SNF8Q96H20 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SNF8Q96H20 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.61■■□□□ 1.05
SNF8Q96H20 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNF8Q96H20 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNF8Q96H20 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SNF8Q96H20 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SNF8Q96H20 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNF8Q96H20 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNF8Q96H20 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNF8Q96H20 AC092667.1-201ENST00000434301 2586 ntBASIC21.6■■□□□ 1.05
SNF8Q96H20 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNF8Q96H20 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.6■■□□□ 1.05
SNF8Q96H20 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.6■■□□□ 1.05
SNF8Q96H20 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
SNF8Q96H20 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNF8Q96H20 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SNF8Q96H20 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNF8Q96H20 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.6■■□□□ 1.05
SNF8Q96H20 GABARAPL3-202ENST00000624044 1851 ntBASIC21.6■■□□□ 1.05
SNF8Q96H20 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNF8Q96H20 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SNF8Q96H20 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SNF8Q96H20 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNF8Q96H20 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNF8Q96H20 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.59■■□□□ 1.05
SNF8Q96H20 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNF8Q96H20 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SNF8Q96H20 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms