Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.7
CHD6Q8TD26 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.39■□□□□ 0.7
CHD6Q8TD26 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.39■□□□□ 0.7
CHD6Q8TD26 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.39■□□□□ 0.7
CHD6Q8TD26 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CHD6Q8TD26 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CHD6Q8TD26 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.39■□□□□ 0.69
CHD6Q8TD26 CLEC4GP1-201ENST00000596555 870 ntBASIC19.39■□□□□ 0.69
CHD6Q8TD26 LINC01568-207ENST00000641790 1380 ntBASIC19.39■□□□□ 0.69
CHD6Q8TD26 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHD6Q8TD26 RBM17P2-201ENST00000616397 1405 ntBASIC19.39■□□□□ 0.69
CHD6Q8TD26 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CHD6Q8TD26 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHD6Q8TD26 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHD6Q8TD26 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.38■□□□□ 0.69
CHD6Q8TD26 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.38■□□□□ 0.69
CHD6Q8TD26 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.38■□□□□ 0.69
CHD6Q8TD26 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.38■□□□□ 0.69
CHD6Q8TD26 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.38■□□□□ 0.69
CHD6Q8TD26 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD6Q8TD26 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD6Q8TD26 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.38■□□□□ 0.69
CHD6Q8TD26 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.38■□□□□ 0.69
CHD6Q8TD26 AL023875.1-201ENST00000640777 796 ntBASIC19.38■□□□□ 0.69
CHD6Q8TD26 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHD6Q8TD26 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD6Q8TD26 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.38■□□□□ 0.69
CHD6Q8TD26 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD6Q8TD26 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD6Q8TD26 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD6Q8TD26 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.38■□□□□ 0.69
CHD6Q8TD26 SLC25A3P1-201ENST00000443844 931 ntBASIC19.38■□□□□ 0.69
CHD6Q8TD26 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.38■□□□□ 0.69
CHD6Q8TD26 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD6Q8TD26 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHD6Q8TD26 AP000550.4-202ENST00000639755 178 ntBASIC19.38■□□□□ 0.69
CHD6Q8TD26 MYC-208ENST00000641036 567 ntBASIC19.38■□□□□ 0.69
CHD6Q8TD26 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD6Q8TD26 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CHD6Q8TD26 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD6Q8TD26 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD6Q8TD26 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD6Q8TD26 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHD6Q8TD26 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD6Q8TD26 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD6Q8TD26 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD6Q8TD26 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD6Q8TD26 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD6Q8TD26 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD6Q8TD26 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.37■□□□□ 0.69
CHD6Q8TD26 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.37■□□□□ 0.69
CHD6Q8TD26 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD6Q8TD26 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD6Q8TD26 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHD6Q8TD26 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHD6Q8TD26 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHD6Q8TD26 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.36■□□□□ 0.69
CHD6Q8TD26 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CHD6Q8TD26 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.36■□□□□ 0.69
CHD6Q8TD26 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CHD6Q8TD26 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD6Q8TD26 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHD6Q8TD26 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD6Q8TD26 FDX1P1-201ENST00000449115 551 ntBASIC19.36■□□□□ 0.69
CHD6Q8TD26 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHD6Q8TD26 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.36■□□□□ 0.69
CHD6Q8TD26 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.35■□□□□ 0.69
CHD6Q8TD26 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD6Q8TD26 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.35■□□□□ 0.69
CHD6Q8TD26 AL137013.1-201ENST00000432946 1228 ntBASIC19.35■□□□□ 0.69
CHD6Q8TD26 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD6Q8TD26 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CHD6Q8TD26 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.35■□□□□ 0.69
CHD6Q8TD26 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.35■□□□□ 0.69
CHD6Q8TD26 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.35■□□□□ 0.69
CHD6Q8TD26 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHD6Q8TD26 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHD6Q8TD26 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHD6Q8TD26 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CHD6Q8TD26 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.34■□□□□ 0.69
CHD6Q8TD26 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CHD6Q8TD26 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CHD6Q8TD26 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHD6Q8TD26 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CHD6Q8TD26 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.34■□□□□ 0.69
CHD6Q8TD26 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.34■□□□□ 0.69
CHD6Q8TD26 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD6Q8TD26 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD6Q8TD26 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.34■□□□□ 0.69
CHD6Q8TD26 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHD6Q8TD26 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.34■□□□□ 0.69
CHD6Q8TD26 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.34■□□□□ 0.69
CHD6Q8TD26 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.34■□□□□ 0.69
CHD6Q8TD26 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD6Q8TD26 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHD6Q8TD26 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHD6Q8TD26 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.33■□□□□ 0.69
CHD6Q8TD26 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHD6Q8TD26 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.33■□□□□ 0.69
CHD6Q8TD26 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms