Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLRN3Q8NCR9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLRN3Q8NCR9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLRN3Q8NCR9 AL022069.1-201ENST00000568025 1636 ntBASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 AC007613.1-201ENST00000572811 2597 ntBASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLRN3Q8NCR9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLRN3Q8NCR9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLRN3Q8NCR9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLRN3Q8NCR9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLRN3Q8NCR9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLRN3Q8NCR9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.8■□□□□ 0.28
CLRN3Q8NCR9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLRN3Q8NCR9 ABHD17AP4-201ENST00000411545 909 ntBASIC16.8■□□□□ 0.28
CLRN3Q8NCR9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLRN3Q8NCR9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLRN3Q8NCR9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.8■□□□□ 0.28
CLRN3Q8NCR9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CLRN3Q8NCR9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CLRN3Q8NCR9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CLRN3Q8NCR9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.79■□□□□ 0.28
CLRN3Q8NCR9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLRN3Q8NCR9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLRN3Q8NCR9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLRN3Q8NCR9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLRN3Q8NCR9 ZNRF2P2-203ENST00000454624 420 ntBASIC16.79■□□□□ 0.28
CLRN3Q8NCR9 AC073314.1-201ENST00000568729 2216 ntBASIC16.79■□□□□ 0.28
CLRN3Q8NCR9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLRN3Q8NCR9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLRN3Q8NCR9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLRN3Q8NCR9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLRN3Q8NCR9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLRN3Q8NCR9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 AC008813.1-201ENST00000536597 885 ntBASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLRN3Q8NCR9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms