Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.54■□□□□ 0.56
DTX3Q8N9I9 AL356740.2-201ENST00000601559 647 ntBASIC18.54■□□□□ 0.56
DTX3Q8N9I9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.54■□□□□ 0.56
DTX3Q8N9I9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.54■□□□□ 0.56
DTX3Q8N9I9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
DTX3Q8N9I9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DTX3Q8N9I9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DTX3Q8N9I9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.54■□□□□ 0.56
DTX3Q8N9I9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.54■□□□□ 0.56
DTX3Q8N9I9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
DTX3Q8N9I9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DTX3Q8N9I9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DTX3Q8N9I9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
DTX3Q8N9I9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DTX3Q8N9I9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DTX3Q8N9I9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DTX3Q8N9I9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
DTX3Q8N9I9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.52■□□□□ 0.56
DTX3Q8N9I9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
DTX3Q8N9I9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
DTX3Q8N9I9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
DTX3Q8N9I9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.52■□□□□ 0.56
DTX3Q8N9I9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DTX3Q8N9I9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.52■□□□□ 0.56
DTX3Q8N9I9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
DTX3Q8N9I9 SNX5-217ENST00000606557 1087 ntBASIC18.52■□□□□ 0.56
DTX3Q8N9I9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DTX3Q8N9I9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DTX3Q8N9I9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.52■□□□□ 0.56
DTX3Q8N9I9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
DTX3Q8N9I9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
DTX3Q8N9I9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DTX3Q8N9I9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
DTX3Q8N9I9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DTX3Q8N9I9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.52■□□□□ 0.55
DTX3Q8N9I9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.52■□□□□ 0.55
DTX3Q8N9I9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DTX3Q8N9I9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DTX3Q8N9I9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DTX3Q8N9I9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.51■□□□□ 0.55
DTX3Q8N9I9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DTX3Q8N9I9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DTX3Q8N9I9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DTX3Q8N9I9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.51■□□□□ 0.55
DTX3Q8N9I9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.51■□□□□ 0.55
DTX3Q8N9I9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.51■□□□□ 0.55
DTX3Q8N9I9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
DTX3Q8N9I9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.51■□□□□ 0.55
DTX3Q8N9I9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
DTX3Q8N9I9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DTX3Q8N9I9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DTX3Q8N9I9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DTX3Q8N9I9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
DTX3Q8N9I9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
DTX3Q8N9I9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
DTX3Q8N9I9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.5■□□□□ 0.55
DTX3Q8N9I9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DTX3Q8N9I9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
DTX3Q8N9I9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DTX3Q8N9I9 AL158211.5-201ENST00000623583 2518 ntBASIC18.5■□□□□ 0.55
DTX3Q8N9I9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DTX3Q8N9I9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DTX3Q8N9I9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
DTX3Q8N9I9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DTX3Q8N9I9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DTX3Q8N9I9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DTX3Q8N9I9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.49■□□□□ 0.55
DTX3Q8N9I9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.49■□□□□ 0.55
DTX3Q8N9I9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.49■□□□□ 0.55
DTX3Q8N9I9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.49■□□□□ 0.55
DTX3Q8N9I9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.49■□□□□ 0.55
DTX3Q8N9I9 DUX4L4-201ENST00000566884 1269 ntBASIC18.49■□□□□ 0.55
DTX3Q8N9I9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.49■□□□□ 0.55
DTX3Q8N9I9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.49■□□□□ 0.55
DTX3Q8N9I9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.49■□□□□ 0.55
DTX3Q8N9I9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms