Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
C3orf56Q8N813 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
C3orf56Q8N813 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
C3orf56Q8N813 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
C3orf56Q8N813 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
C3orf56Q8N813 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.52■□□□□ 0.23
C3orf56Q8N813 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
C3orf56Q8N813 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
C3orf56Q8N813 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
C3orf56Q8N813 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.51■□□□□ 0.23
C3orf56Q8N813 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
C3orf56Q8N813 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
C3orf56Q8N813 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
C3orf56Q8N813 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
C3orf56Q8N813 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.51■□□□□ 0.23
C3orf56Q8N813 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
C3orf56Q8N813 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
C3orf56Q8N813 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.51■□□□□ 0.23
C3orf56Q8N813 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.51■□□□□ 0.23
C3orf56Q8N813 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
C3orf56Q8N813 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.51■□□□□ 0.23
C3orf56Q8N813 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
C3orf56Q8N813 CYP2T3P-201ENST00000601990 817 ntBASIC16.51■□□□□ 0.23
C3orf56Q8N813 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.51■□□□□ 0.23
C3orf56Q8N813 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.51■□□□□ 0.23
C3orf56Q8N813 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
C3orf56Q8N813 OR7E47P-201ENST00000546390 1422 ntBASIC16.51■□□□□ 0.23
C3orf56Q8N813 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
C3orf56Q8N813 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
C3orf56Q8N813 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
C3orf56Q8N813 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
C3orf56Q8N813 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
C3orf56Q8N813 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
C3orf56Q8N813 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.5■□□□□ 0.23
C3orf56Q8N813 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.5■□□□□ 0.23
C3orf56Q8N813 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.5■□□□□ 0.23
C3orf56Q8N813 AC060766.5-201ENST00000590539 871 ntBASIC16.5■□□□□ 0.23
C3orf56Q8N813 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
C3orf56Q8N813 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
C3orf56Q8N813 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
C3orf56Q8N813 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.5■□□□□ 0.23
C3orf56Q8N813 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
C3orf56Q8N813 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
C3orf56Q8N813 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C3orf56Q8N813 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.49■□□□□ 0.23
C3orf56Q8N813 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.49■□□□□ 0.23
C3orf56Q8N813 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
C3orf56Q8N813 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
C3orf56Q8N813 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.49■□□□□ 0.23
C3orf56Q8N813 Z99916.2-201ENST00000604037 246 ntBASIC16.49■□□□□ 0.23
C3orf56Q8N813 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C3orf56Q8N813 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
C3orf56Q8N813 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C3orf56Q8N813 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
C3orf56Q8N813 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
C3orf56Q8N813 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.48■□□□□ 0.23
C3orf56Q8N813 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C3orf56Q8N813 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C3orf56Q8N813 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C3orf56Q8N813 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.48■□□□□ 0.23
C3orf56Q8N813 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.48■□□□□ 0.23
C3orf56Q8N813 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C3orf56Q8N813 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.48■□□□□ 0.23
C3orf56Q8N813 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.48■□□□□ 0.23
C3orf56Q8N813 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
C3orf56Q8N813 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.48■□□□□ 0.23
C3orf56Q8N813 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.48■□□□□ 0.23
C3orf56Q8N813 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
C3orf56Q8N813 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.48■□□□□ 0.23
C3orf56Q8N813 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
C3orf56Q8N813 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C3orf56Q8N813 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C3orf56Q8N813 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.48■□□□□ 0.23
C3orf56Q8N813 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.48■□□□□ 0.23
C3orf56Q8N813 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C3orf56Q8N813 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
C3orf56Q8N813 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
C3orf56Q8N813 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C3orf56Q8N813 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.47■□□□□ 0.23
C3orf56Q8N813 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C3orf56Q8N813 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
C3orf56Q8N813 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.47■□□□□ 0.23
C3orf56Q8N813 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
C3orf56Q8N813 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.47■□□□□ 0.23
C3orf56Q8N813 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.47■□□□□ 0.23
C3orf56Q8N813 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.47■□□□□ 0.23
C3orf56Q8N813 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.47■□□□□ 0.23
C3orf56Q8N813 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.47■□□□□ 0.23
C3orf56Q8N813 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
C3orf56Q8N813 HLA-B-256ENST00000639848 1089 ntBASIC16.47■□□□□ 0.23
C3orf56Q8N813 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
C3orf56Q8N813 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
C3orf56Q8N813 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C3orf56Q8N813 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
C3orf56Q8N813 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C3orf56Q8N813 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
C3orf56Q8N813 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
C3orf56Q8N813 RBM17P2-201ENST00000616397 1405 ntBASIC16.46■□□□□ 0.23
C3orf56Q8N813 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
C3orf56Q8N813 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms