Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TTC9CQ8N5M4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TTC9CQ8N5M4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TTC9CQ8N5M4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TTC9CQ8N5M4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TTC9CQ8N5M4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.65■□□□□ 0.26
TTC9CQ8N5M4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TTC9CQ8N5M4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.65■□□□□ 0.26
TTC9CQ8N5M4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.65■□□□□ 0.26
TTC9CQ8N5M4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TTC9CQ8N5M4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TTC9CQ8N5M4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TTC9CQ8N5M4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
TTC9CQ8N5M4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
TTC9CQ8N5M4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.65■□□□□ 0.26
TTC9CQ8N5M4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.65■□□□□ 0.26
TTC9CQ8N5M4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
TTC9CQ8N5M4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TTC9CQ8N5M4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.64■□□□□ 0.26
TTC9CQ8N5M4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 AC027612.3-201ENST00000413684 1047 ntBASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 MIR6084-201ENST00000622012 110 ntBASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TTC9CQ8N5M4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TTC9CQ8N5M4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9CQ8N5M4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9CQ8N5M4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9CQ8N5M4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9CQ8N5M4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TTC9CQ8N5M4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.62■□□□□ 0.25
TTC9CQ8N5M4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9CQ8N5M4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9CQ8N5M4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9CQ8N5M4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9CQ8N5M4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TTC9CQ8N5M4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9CQ8N5M4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.62■□□□□ 0.25
TTC9CQ8N5M4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9CQ8N5M4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TTC9CQ8N5M4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9CQ8N5M4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TTC9CQ8N5M4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TTC9CQ8N5M4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms