Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DDX60Q8IY21 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC26.26■■□□□ 1.79
DDX60Q8IY21 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
DDX60Q8IY21 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC26.26■■□□□ 1.79
DDX60Q8IY21 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC26.26■■□□□ 1.79
DDX60Q8IY21 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC26.26■■□□□ 1.79
DDX60Q8IY21 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC26.26■■□□□ 1.79
DDX60Q8IY21 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.26■■□□□ 1.79
DDX60Q8IY21 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC26.26■■□□□ 1.79
DDX60Q8IY21 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.25■■□□□ 1.79
DDX60Q8IY21 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
DDX60Q8IY21 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.25■■□□□ 1.79
DDX60Q8IY21 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX60Q8IY21 AC012676.1-201ENST00000574705 1949 ntBASIC26.25■■□□□ 1.79
DDX60Q8IY21 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
DDX60Q8IY21 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.25■■□□□ 1.79
DDX60Q8IY21 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX60Q8IY21 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC26.25■■□□□ 1.79
DDX60Q8IY21 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX60Q8IY21 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
DDX60Q8IY21 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX60Q8IY21 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC26.24■■□□□ 1.79
DDX60Q8IY21 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC26.24■■□□□ 1.79
DDX60Q8IY21 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
DDX60Q8IY21 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC26.24■■□□□ 1.79
DDX60Q8IY21 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
DDX60Q8IY21 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX60Q8IY21 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC26.24■■□□□ 1.79
DDX60Q8IY21 POU5F1P3-201ENST00000428824 1078 ntBASIC26.24■■□□□ 1.79
DDX60Q8IY21 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.24■■□□□ 1.79
DDX60Q8IY21 C1orf229-201ENST00000623686 2258 ntBASIC26.24■■□□□ 1.79
DDX60Q8IY21 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
DDX60Q8IY21 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
DDX60Q8IY21 C9orf163-202ENST00000624034 2573 ntBASIC26.23■■□□□ 1.79
DDX60Q8IY21 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
DDX60Q8IY21 C11orf96-202ENST00000528572 1834 ntBASIC26.23■■□□□ 1.79
DDX60Q8IY21 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
DDX60Q8IY21 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.23■■□□□ 1.79
DDX60Q8IY21 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.23■■□□□ 1.79
DDX60Q8IY21 AC091874.3-201ENST00000512672 1195 ntBASIC26.23■■□□□ 1.79
DDX60Q8IY21 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
DDX60Q8IY21 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
DDX60Q8IY21 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
DDX60Q8IY21 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
DDX60Q8IY21 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
DDX60Q8IY21 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
DDX60Q8IY21 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
DDX60Q8IY21 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.22■■□□□ 1.79
DDX60Q8IY21 AC091799.1-201ENST00000422823 811 ntBASIC26.22■■□□□ 1.79
DDX60Q8IY21 AC098590.1-201ENST00000468126 897 ntBASIC26.22■■□□□ 1.79
DDX60Q8IY21 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
DDX60Q8IY21 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.22■■□□□ 1.79
DDX60Q8IY21 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
DDX60Q8IY21 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
DDX60Q8IY21 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC26.22■■□□□ 1.79
DDX60Q8IY21 ITM2C-210ENST00000620962 501 ntBASIC26.22■■□□□ 1.79
DDX60Q8IY21 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.21■■□□□ 1.79
DDX60Q8IY21 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
DDX60Q8IY21 AC010542.4-201ENST00000563151 1910 ntBASIC26.21■■□□□ 1.79
DDX60Q8IY21 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
DDX60Q8IY21 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
DDX60Q8IY21 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
DDX60Q8IY21 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.21■■□□□ 1.79
DDX60Q8IY21 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
DDX60Q8IY21 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC26.21■■□□□ 1.79
DDX60Q8IY21 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC26.21■■□□□ 1.79
DDX60Q8IY21 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC26.21■■□□□ 1.79
DDX60Q8IY21 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
DDX60Q8IY21 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC26.21■■□□□ 1.79
DDX60Q8IY21 AC092053.2-201ENST00000640557 1818 ntBASIC26.21■■□□□ 1.79
DDX60Q8IY21 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
DDX60Q8IY21 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
DDX60Q8IY21 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
DDX60Q8IY21 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
DDX60Q8IY21 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.2■■□□□ 1.79
DDX60Q8IY21 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC26.2■■□□□ 1.79
DDX60Q8IY21 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
DDX60Q8IY21 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
DDX60Q8IY21 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
DDX60Q8IY21 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
DDX60Q8IY21 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
DDX60Q8IY21 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.2■■□□□ 1.78
DDX60Q8IY21 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.2■■□□□ 1.78
DDX60Q8IY21 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.2■■□□□ 1.78
DDX60Q8IY21 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
DDX60Q8IY21 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX60Q8IY21 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC26.19■■□□□ 1.78
DDX60Q8IY21 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC26.19■■□□□ 1.78
DDX60Q8IY21 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX60Q8IY21 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.19■■□□□ 1.78
DDX60Q8IY21 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
DDX60Q8IY21 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX60Q8IY21 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
DDX60Q8IY21 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.18■■□□□ 1.78
DDX60Q8IY21 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX60Q8IY21 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX60Q8IY21 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
DDX60Q8IY21 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX60Q8IY21 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
DDX60Q8IY21 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms