Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.75■□□□□ 0.91
APLFQ8IW19 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
APLFQ8IW19 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APLFQ8IW19 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APLFQ8IW19 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
APLFQ8IW19 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.74■□□□□ 0.91
APLFQ8IW19 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.74■□□□□ 0.91
APLFQ8IW19 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
APLFQ8IW19 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APLFQ8IW19 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APLFQ8IW19 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
APLFQ8IW19 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APLFQ8IW19 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APLFQ8IW19 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APLFQ8IW19 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APLFQ8IW19 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.74■□□□□ 0.91
APLFQ8IW19 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APLFQ8IW19 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.74■□□□□ 0.91
APLFQ8IW19 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.74■□□□□ 0.91
APLFQ8IW19 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.74■□□□□ 0.91
APLFQ8IW19 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
APLFQ8IW19 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
APLFQ8IW19 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APLFQ8IW19 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
APLFQ8IW19 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
APLFQ8IW19 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
APLFQ8IW19 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
APLFQ8IW19 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APLFQ8IW19 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APLFQ8IW19 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
APLFQ8IW19 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APLFQ8IW19 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APLFQ8IW19 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
APLFQ8IW19 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.73■□□□□ 0.91
APLFQ8IW19 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APLFQ8IW19 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.73■□□□□ 0.91
APLFQ8IW19 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
APLFQ8IW19 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.73■□□□□ 0.91
APLFQ8IW19 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
APLFQ8IW19 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APLFQ8IW19 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.73■□□□□ 0.91
APLFQ8IW19 OR2I1P-207ENST00000453522 948 ntBASIC20.73■□□□□ 0.91
APLFQ8IW19 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
APLFQ8IW19 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.73■□□□□ 0.91
APLFQ8IW19 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APLFQ8IW19 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
APLFQ8IW19 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
APLFQ8IW19 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
APLFQ8IW19 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.73■□□□□ 0.91
APLFQ8IW19 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
APLFQ8IW19 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APLFQ8IW19 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
APLFQ8IW19 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.72■□□□□ 0.91
APLFQ8IW19 AC080038.3-201ENST00000623346 1952 ntBASIC20.72■□□□□ 0.91
APLFQ8IW19 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
APLFQ8IW19 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
APLFQ8IW19 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
APLFQ8IW19 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APLFQ8IW19 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.72■□□□□ 0.91
APLFQ8IW19 CCDC92B-201ENST00000575506 885 ntBASIC20.72■□□□□ 0.91
APLFQ8IW19 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.72■□□□□ 0.91
APLFQ8IW19 MIR6084-201ENST00000622012 110 ntBASIC20.72■□□□□ 0.91
APLFQ8IW19 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
APLFQ8IW19 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
APLFQ8IW19 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.72■□□□□ 0.91
APLFQ8IW19 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APLFQ8IW19 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APLFQ8IW19 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
APLFQ8IW19 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
APLFQ8IW19 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APLFQ8IW19 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
APLFQ8IW19 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APLFQ8IW19 FP325331.1-202ENST00000623531 1380 ntBASIC20.72■□□□□ 0.91
APLFQ8IW19 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
APLFQ8IW19 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APLFQ8IW19 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
APLFQ8IW19 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
APLFQ8IW19 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APLFQ8IW19 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APLFQ8IW19 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.71■□□□□ 0.91
APLFQ8IW19 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
APLFQ8IW19 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
APLFQ8IW19 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
APLFQ8IW19 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
APLFQ8IW19 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APLFQ8IW19 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APLFQ8IW19 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APLFQ8IW19 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APLFQ8IW19 AL020996.1-203ENST00000536896 2307 ntBASIC20.71■□□□□ 0.91
APLFQ8IW19 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
APLFQ8IW19 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
APLFQ8IW19 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
APLFQ8IW19 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APLFQ8IW19 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.7■□□□□ 0.91
APLFQ8IW19 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
APLFQ8IW19 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APLFQ8IW19 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APLFQ8IW19 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
APLFQ8IW19 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APLFQ8IW19 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms