Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
YTHDF3Q7Z739 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
YTHDF3Q7Z739 AC103834.1-201ENST00000520383 144 ntBASIC20.91■□□□□ 0.94
YTHDF3Q7Z739 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
YTHDF3Q7Z739 LINC01529-204ENST00000636474 1715 ntBASIC20.91■□□□□ 0.94
YTHDF3Q7Z739 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
YTHDF3Q7Z739 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
YTHDF3Q7Z739 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
YTHDF3Q7Z739 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 RPS2P7-201ENST00000447334 885 ntBASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
YTHDF3Q7Z739 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
YTHDF3Q7Z739 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
YTHDF3Q7Z739 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
YTHDF3Q7Z739 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
YTHDF3Q7Z739 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.89■□□□□ 0.93
YTHDF3Q7Z739 THA1P-201ENST00000590384 1145 ntBASIC20.89■□□□□ 0.93
YTHDF3Q7Z739 AC011551.1-201ENST00000614101 683 ntBASIC20.89■□□□□ 0.93
YTHDF3Q7Z739 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
YTHDF3Q7Z739 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.89■□□□□ 0.93
YTHDF3Q7Z739 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.89■□□□□ 0.93
YTHDF3Q7Z739 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
YTHDF3Q7Z739 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
YTHDF3Q7Z739 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
YTHDF3Q7Z739 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 PVT1_1.1-201ENST00000615125 194 ntBASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 AC116562.4-201ENST00000641316 2276 ntBASIC20.88■□□□□ 0.93
YTHDF3Q7Z739 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 AC027702.1-201ENST00000563810 1770 ntBASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 GUSBP5-201ENST00000418136 578 ntBASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 AL162377.1-201ENST00000618844 1793 ntBASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
YTHDF3Q7Z739 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
YTHDF3Q7Z739 AC020907.5-201ENST00000624372 1936 ntBASIC20.86■□□□□ 0.93
YTHDF3Q7Z739 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
YTHDF3Q7Z739 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
YTHDF3Q7Z739 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
YTHDF3Q7Z739 AP000974.1-201ENST00000623909 2387 ntBASIC20.86■□□□□ 0.93
YTHDF3Q7Z739 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
YTHDF3Q7Z739 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.86■□□□□ 0.93
YTHDF3Q7Z739 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.86■□□□□ 0.93
YTHDF3Q7Z739 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.86■□□□□ 0.93
YTHDF3Q7Z739 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
YTHDF3Q7Z739 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
YTHDF3Q7Z739 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
YTHDF3Q7Z739 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
YTHDF3Q7Z739 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.85■□□□□ 0.93
YTHDF3Q7Z739 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
YTHDF3Q7Z739 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
YTHDF3Q7Z739 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms