Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC092068.2-201ENST00000590491 1708 ntBASIC14.82□□□□□ -0.04
CSMD3Q7Z407 KRT16P2-201ENST00000414673 1423 ntBASIC14.82□□□□□ -0.04
CSMD3Q7Z407 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSMD3Q7Z407 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 AL355472.2-201ENST00000422958 438 ntBASIC14.81□□□□□ -0.04
CSMD3Q7Z407 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 AC097493.4-201ENST00000641197 219 ntBASIC14.81□□□□□ -0.04
CSMD3Q7Z407 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.81□□□□□ -0.04
CSMD3Q7Z407 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.8□□□□□ -0.04
CSMD3Q7Z407 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.8□□□□□ -0.04
CSMD3Q7Z407 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.8□□□□□ -0.04
CSMD3Q7Z407 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD3Q7Z407 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.8□□□□□ -0.04
CSMD3Q7Z407 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC14.8□□□□□ -0.04
CSMD3Q7Z407 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD3Q7Z407 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD3Q7Z407 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CSMD3Q7Z407 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.8□□□□□ -0.04
CSMD3Q7Z407 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD3Q7Z407 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD3Q7Z407 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.8□□□□□ -0.04
CSMD3Q7Z407 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSMD3Q7Z407 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.8□□□□□ -0.04
CSMD3Q7Z407 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CSMD3Q7Z407 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD3Q7Z407 ANOS2P-203ENST00000472227 1816 ntBASIC14.79□□□□□ -0.04
CSMD3Q7Z407 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD3Q7Z407 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD3Q7Z407 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CSMD3Q7Z407 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD3Q7Z407 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.79□□□□□ -0.04
CSMD3Q7Z407 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.79□□□□□ -0.04
CSMD3Q7Z407 FAM197Y4-202ENST00000622692 608 ntBASIC14.79□□□□□ -0.04
CSMD3Q7Z407 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD3Q7Z407 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.79□□□□□ -0.04
CSMD3Q7Z407 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.79□□□□□ -0.04
CSMD3Q7Z407 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.79□□□□□ -0.04
CSMD3Q7Z407 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
CSMD3Q7Z407 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD3Q7Z407 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSMD3Q7Z407 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD3Q7Z407 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD3Q7Z407 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD3Q7Z407 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD3Q7Z407 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.78□□□□□ -0.04
CSMD3Q7Z407 PNMA6B-201ENST00000538162 1200 ntBASIC14.78□□□□□ -0.04
CSMD3Q7Z407 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD3Q7Z407 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD3Q7Z407 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD3Q7Z407 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD3Q7Z407 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD3Q7Z407 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD3Q7Z407 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD3Q7Z407 KRT18P21-201ENST00000515767 1272 ntBASIC14.78□□□□□ -0.04
CSMD3Q7Z407 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD3Q7Z407 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD3Q7Z407 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC14.78□□□□□ -0.04
CSMD3Q7Z407 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CSMD3Q7Z407 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CSMD3Q7Z407 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.78□□□□□ -0.04
CSMD3Q7Z407 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CSMD3Q7Z407 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms