Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LPCAT4Q643R3 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.87■□□□□ 0.77
LPCAT4Q643R3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LPCAT4Q643R3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LPCAT4Q643R3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.87■□□□□ 0.77
LPCAT4Q643R3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
LPCAT4Q643R3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.87■□□□□ 0.77
LPCAT4Q643R3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.87■□□□□ 0.77
LPCAT4Q643R3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.86■□□□□ 0.77
LPCAT4Q643R3 AC098818.2-201ENST00000564925 2320 ntBASIC19.86■□□□□ 0.77
LPCAT4Q643R3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
LPCAT4Q643R3 RNF126P1-201ENST00000567452 1320 ntBASIC19.86■□□□□ 0.77
LPCAT4Q643R3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.86■□□□□ 0.77
LPCAT4Q643R3 THA1P-201ENST00000590384 1145 ntBASIC19.86■□□□□ 0.77
LPCAT4Q643R3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LPCAT4Q643R3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.86■□□□□ 0.77
LPCAT4Q643R3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LPCAT4Q643R3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LPCAT4Q643R3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
LPCAT4Q643R3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LPCAT4Q643R3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
LPCAT4Q643R3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LPCAT4Q643R3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
LPCAT4Q643R3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LPCAT4Q643R3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LPCAT4Q643R3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 AC018445.3-201ENST00000624177 1945 ntBASIC19.85■□□□□ 0.77
LPCAT4Q643R3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.85■□□□□ 0.77
LPCAT4Q643R3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.84■□□□□ 0.77
LPCAT4Q643R3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT4Q643R3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT4Q643R3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LPCAT4Q643R3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT4Q643R3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT4Q643R3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT4Q643R3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT4Q643R3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LPCAT4Q643R3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT4Q643R3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT4Q643R3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
LPCAT4Q643R3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT4Q643R3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT4Q643R3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LPCAT4Q643R3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LPCAT4Q643R3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.83■□□□□ 0.77
LPCAT4Q643R3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LPCAT4Q643R3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LPCAT4Q643R3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
LPCAT4Q643R3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
LPCAT4Q643R3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.83■□□□□ 0.77
LPCAT4Q643R3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LPCAT4Q643R3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LPCAT4Q643R3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LPCAT4Q643R3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LPCAT4Q643R3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LPCAT4Q643R3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.83■□□□□ 0.76
LPCAT4Q643R3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
LPCAT4Q643R3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.83■□□□□ 0.76
LPCAT4Q643R3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.76
LPCAT4Q643R3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LPCAT4Q643R3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms