Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.65■□□□□ 0.74
HLA-DQA1Q5Y7H0 KRT19P1-201ENST00000405746 1186 ntBASIC19.65■□□□□ 0.74
HLA-DQA1Q5Y7H0 AL162430.1-201ENST00000480705 870 ntBASIC19.65■□□□□ 0.74
HLA-DQA1Q5Y7H0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.65■□□□□ 0.74
HLA-DQA1Q5Y7H0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
HLA-DQA1Q5Y7H0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQA1Q5Y7H0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HLA-DQA1Q5Y7H0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.65■□□□□ 0.74
HLA-DQA1Q5Y7H0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HLA-DQA1Q5Y7H0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQA1Q5Y7H0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQA1Q5Y7H0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQA1Q5Y7H0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQA1Q5Y7H0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.65■□□□□ 0.74
HLA-DQA1Q5Y7H0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQA1Q5Y7H0 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.64■□□□□ 0.74
HLA-DQA1Q5Y7H0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
HLA-DQA1Q5Y7H0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HLA-DQA1Q5Y7H0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HLA-DQA1Q5Y7H0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQA1Q5Y7H0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.64■□□□□ 0.73
HLA-DQA1Q5Y7H0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQA1Q5Y7H0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.64■□□□□ 0.73
HLA-DQA1Q5Y7H0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.64■□□□□ 0.73
HLA-DQA1Q5Y7H0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.64■□□□□ 0.73
HLA-DQA1Q5Y7H0 AC004854.2-201ENST00000608450 1441 ntBASIC19.64■□□□□ 0.73
HLA-DQA1Q5Y7H0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.64■□□□□ 0.73
HLA-DQA1Q5Y7H0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQA1Q5Y7H0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQA1Q5Y7H0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQA1Q5Y7H0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
HLA-DQA1Q5Y7H0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
HLA-DQA1Q5Y7H0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.64■□□□□ 0.73
HLA-DQA1Q5Y7H0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQA1Q5Y7H0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQA1Q5Y7H0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQA1Q5Y7H0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DQA1Q5Y7H0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
HLA-DQA1Q5Y7H0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQA1Q5Y7H0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQA1Q5Y7H0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQA1Q5Y7H0 AP004607.4-201ENST00000530158 1459 ntBASIC19.63■□□□□ 0.73
HLA-DQA1Q5Y7H0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.63■□□□□ 0.73
HLA-DQA1Q5Y7H0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQA1Q5Y7H0 KRT18P5-201ENST00000436075 1291 ntBASIC19.63■□□□□ 0.73
HLA-DQA1Q5Y7H0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.63■□□□□ 0.73
HLA-DQA1Q5Y7H0 AC053503.5-201ENST00000601508 636 ntBASIC19.63■□□□□ 0.73
HLA-DQA1Q5Y7H0 AC104187.1-201ENST00000607510 612 ntBASIC19.63■□□□□ 0.73
HLA-DQA1Q5Y7H0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
HLA-DQA1Q5Y7H0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQA1Q5Y7H0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.63■□□□□ 0.73
HLA-DQA1Q5Y7H0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQA1Q5Y7H0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQA1Q5Y7H0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 FBXW4P1-201ENST00000426721 2239 ntBASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.62■□□□□ 0.73
HLA-DQA1Q5Y7H0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA1Q5Y7H0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HLA-DQA1Q5Y7H0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.61■□□□□ 0.73
HLA-DQA1Q5Y7H0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA1Q5Y7H0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HLA-DQA1Q5Y7H0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.61■□□□□ 0.73
HLA-DQA1Q5Y7H0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-DQA1Q5Y7H0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-DQA1Q5Y7H0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA1Q5Y7H0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA1Q5Y7H0 EEF1DP3-203ENST00000566025 782 ntBASIC19.61■□□□□ 0.73
HLA-DQA1Q5Y7H0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA1Q5Y7H0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.61■□□□□ 0.73
HLA-DQA1Q5Y7H0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA1Q5Y7H0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA1Q5Y7H0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA1Q5Y7H0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA1Q5Y7H0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQA1Q5Y7H0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DQA1Q5Y7H0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms