Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 KRT18P57-201ENST00000443599 1254 ntBASIC20.77■□□□□ 0.91
RIF1Q5UIP0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RIF1Q5UIP0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
RIF1Q5UIP0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
RIF1Q5UIP0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
RIF1Q5UIP0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RIF1Q5UIP0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIF1Q5UIP0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIF1Q5UIP0 AC113347.1-201ENST00000413321 391 ntBASIC20.76■□□□□ 0.91
RIF1Q5UIP0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RIF1Q5UIP0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RIF1Q5UIP0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.76■□□□□ 0.91
RIF1Q5UIP0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIF1Q5UIP0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.76■□□□□ 0.91
RIF1Q5UIP0 AC022211.4-201ENST00000625094 2161 ntBASIC20.76■□□□□ 0.91
RIF1Q5UIP0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIF1Q5UIP0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
RIF1Q5UIP0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RIF1Q5UIP0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIF1Q5UIP0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
RIF1Q5UIP0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.76■□□□□ 0.91
RIF1Q5UIP0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.76■□□□□ 0.91
RIF1Q5UIP0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIF1Q5UIP0 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.76■□□□□ 0.91
RIF1Q5UIP0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.75■□□□□ 0.91
RIF1Q5UIP0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RIF1Q5UIP0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIF1Q5UIP0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.75■□□□□ 0.91
RIF1Q5UIP0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RIF1Q5UIP0 AC239809.2-201ENST00000415381 517 ntBASIC20.75■□□□□ 0.91
RIF1Q5UIP0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.75■□□□□ 0.91
RIF1Q5UIP0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.75■□□□□ 0.91
RIF1Q5UIP0 AC124016.1-201ENST00000609552 612 ntBASIC20.75■□□□□ 0.91
RIF1Q5UIP0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RIF1Q5UIP0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.75■□□□□ 0.91
RIF1Q5UIP0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIF1Q5UIP0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RIF1Q5UIP0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RIF1Q5UIP0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.75■□□□□ 0.91
RIF1Q5UIP0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.75■□□□□ 0.91
RIF1Q5UIP0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.75■□□□□ 0.91
RIF1Q5UIP0 AL121894.2-201ENST00000602977 491 ntBASIC20.75■□□□□ 0.91
RIF1Q5UIP0 AC120498.10-201ENST00000621827 505 ntBASIC20.75■□□□□ 0.91
RIF1Q5UIP0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RIF1Q5UIP0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.74■□□□□ 0.91
RIF1Q5UIP0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIF1Q5UIP0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.74■□□□□ 0.91
RIF1Q5UIP0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIF1Q5UIP0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RIF1Q5UIP0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.74■□□□□ 0.91
RIF1Q5UIP0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.74■□□□□ 0.91
RIF1Q5UIP0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RIF1Q5UIP0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.74■□□□□ 0.91
RIF1Q5UIP0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.74■□□□□ 0.91
RIF1Q5UIP0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIF1Q5UIP0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RIF1Q5UIP0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIF1Q5UIP0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIF1Q5UIP0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIF1Q5UIP0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RIF1Q5UIP0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RIF1Q5UIP0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.73■□□□□ 0.91
RIF1Q5UIP0 AL589743.5-201ENST00000616611 1050 ntBASIC20.73■□□□□ 0.91
RIF1Q5UIP0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RIF1Q5UIP0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RIF1Q5UIP0 AC092368.3-202ENST00000574180 1591 ntBASIC20.73■□□□□ 0.91
RIF1Q5UIP0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIF1Q5UIP0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RIF1Q5UIP0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RIF1Q5UIP0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RIF1Q5UIP0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIF1Q5UIP0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RIF1Q5UIP0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RIF1Q5UIP0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RIF1Q5UIP0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RIF1Q5UIP0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIF1Q5UIP0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIF1Q5UIP0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RIF1Q5UIP0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RIF1Q5UIP0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RIF1Q5UIP0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RIF1Q5UIP0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RIF1Q5UIP0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RIF1Q5UIP0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RIF1Q5UIP0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIF1Q5UIP0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.71■□□□□ 0.91
RIF1Q5UIP0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIF1Q5UIP0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIF1Q5UIP0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RIF1Q5UIP0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.71■□□□□ 0.91
RIF1Q5UIP0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RIF1Q5UIP0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RIF1Q5UIP0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RIF1Q5UIP0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.71■□□□□ 0.91
RIF1Q5UIP0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.71■□□□□ 0.91
RIF1Q5UIP0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.71■□□□□ 0.91
RIF1Q5UIP0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.71■□□□□ 0.91
RIF1Q5UIP0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.71■□□□□ 0.91
RIF1Q5UIP0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RIF1Q5UIP0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms