Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 AC099791.2-201ENST00000605725 427 ntBASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00242Q5T6M2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00242Q5T6M2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
LINC00242Q5T6M2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC00242Q5T6M2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00242Q5T6M2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00242Q5T6M2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00242Q5T6M2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00242Q5T6M2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC00242Q5T6M2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC00242Q5T6M2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC00242Q5T6M2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00242Q5T6M2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LINC00242Q5T6M2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00242Q5T6M2 AP004607.7-201ENST00000527152 1677 ntBASIC14.39□□□□□ -0.11
LINC00242Q5T6M2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00242Q5T6M2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
LINC00242Q5T6M2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00242Q5T6M2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00242Q5T6M2 AC073314.1-201ENST00000568729 2216 ntBASIC14.38□□□□□ -0.11
LINC00242Q5T6M2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00242Q5T6M2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00242Q5T6M2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00242Q5T6M2 MIR3181-201ENST00000578512 73 ntBASIC14.38□□□□□ -0.11
LINC00242Q5T6M2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LINC00242Q5T6M2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00242Q5T6M2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00242Q5T6M2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
LINC00242Q5T6M2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LINC00242Q5T6M2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00242Q5T6M2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC00242Q5T6M2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00242Q5T6M2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00242Q5T6M2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00242Q5T6M2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00242Q5T6M2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
LINC00242Q5T6M2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 PLK5-205ENST00000642079 1969 ntBASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00242Q5T6M2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms