Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RUNDC3AQ59EK9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.89■□□□□ 0.77
RUNDC3AQ59EK9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RUNDC3AQ59EK9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RUNDC3AQ59EK9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.89■□□□□ 0.77
RUNDC3AQ59EK9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.89■□□□□ 0.77
RUNDC3AQ59EK9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RUNDC3AQ59EK9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RUNDC3AQ59EK9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
RUNDC3AQ59EK9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.89■□□□□ 0.77
RUNDC3AQ59EK9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RUNDC3AQ59EK9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.89■□□□□ 0.77
RUNDC3AQ59EK9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RUNDC3AQ59EK9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RUNDC3AQ59EK9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.88■□□□□ 0.77
RUNDC3AQ59EK9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RUNDC3AQ59EK9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RUNDC3AQ59EK9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.88■□□□□ 0.77
RUNDC3AQ59EK9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RUNDC3AQ59EK9 AC006128.1-201ENST00000624704 1661 ntBASIC19.88■□□□□ 0.77
RUNDC3AQ59EK9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RUNDC3AQ59EK9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.88■□□□□ 0.77
RUNDC3AQ59EK9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.88■□□□□ 0.77
RUNDC3AQ59EK9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.88■□□□□ 0.77
RUNDC3AQ59EK9 MIR4466-201ENST00000606121 54 ntBASIC19.88■□□□□ 0.77
RUNDC3AQ59EK9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RUNDC3AQ59EK9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RUNDC3AQ59EK9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RUNDC3AQ59EK9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RUNDC3AQ59EK9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.87■□□□□ 0.77
RUNDC3AQ59EK9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.86■□□□□ 0.77
RUNDC3AQ59EK9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RUNDC3AQ59EK9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RUNDC3AQ59EK9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RUNDC3AQ59EK9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.85■□□□□ 0.77
RUNDC3AQ59EK9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RUNDC3AQ59EK9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RUNDC3AQ59EK9 PLK5-205ENST00000642079 1969 ntBASIC19.85■□□□□ 0.77
RUNDC3AQ59EK9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.85■□□□□ 0.77
RUNDC3AQ59EK9 SMUG1P1-201ENST00000590640 811 ntBASIC19.85■□□□□ 0.77
RUNDC3AQ59EK9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.85■□□□□ 0.77
RUNDC3AQ59EK9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.85■□□□□ 0.77
RUNDC3AQ59EK9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RUNDC3AQ59EK9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RUNDC3AQ59EK9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RUNDC3AQ59EK9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RUNDC3AQ59EK9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.85■□□□□ 0.77
RUNDC3AQ59EK9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RUNDC3AQ59EK9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RUNDC3AQ59EK9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RUNDC3AQ59EK9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RUNDC3AQ59EK9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RUNDC3AQ59EK9 GABARAPL3-202ENST00000624044 1851 ntBASIC19.84■□□□□ 0.77
RUNDC3AQ59EK9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.84■□□□□ 0.77
RUNDC3AQ59EK9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.84■□□□□ 0.77
RUNDC3AQ59EK9 AC092667.1-201ENST00000434301 2586 ntBASIC19.84■□□□□ 0.77
RUNDC3AQ59EK9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RUNDC3AQ59EK9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms