Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNAI3Q3KNW1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNAI3Q3KNW1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNAI3Q3KNW1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SNAI3Q3KNW1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNAI3Q3KNW1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.28■□□□□ 0.52
SNAI3Q3KNW1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.28■□□□□ 0.52
SNAI3Q3KNW1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNAI3Q3KNW1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNAI3Q3KNW1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNAI3Q3KNW1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.28■□□□□ 0.52
SNAI3Q3KNW1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNAI3Q3KNW1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNAI3Q3KNW1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.28■□□□□ 0.52
SNAI3Q3KNW1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SNAI3Q3KNW1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SNAI3Q3KNW1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.28■□□□□ 0.52
SNAI3Q3KNW1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNAI3Q3KNW1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNAI3Q3KNW1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.27■□□□□ 0.52
SNAI3Q3KNW1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNAI3Q3KNW1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SNAI3Q3KNW1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.27■□□□□ 0.52
SNAI3Q3KNW1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNAI3Q3KNW1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNAI3Q3KNW1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNAI3Q3KNW1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
SNAI3Q3KNW1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNAI3Q3KNW1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNAI3Q3KNW1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.27■□□□□ 0.51
SNAI3Q3KNW1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNAI3Q3KNW1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNAI3Q3KNW1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNAI3Q3KNW1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNAI3Q3KNW1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNAI3Q3KNW1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SNAI3Q3KNW1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNAI3Q3KNW1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.26■□□□□ 0.51
SNAI3Q3KNW1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.26■□□□□ 0.51
SNAI3Q3KNW1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.26■□□□□ 0.51
SNAI3Q3KNW1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SNAI3Q3KNW1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.26■□□□□ 0.51
SNAI3Q3KNW1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNAI3Q3KNW1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNAI3Q3KNW1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNAI3Q3KNW1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.26■□□□□ 0.51
SNAI3Q3KNW1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNAI3Q3KNW1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.24■□□□□ 0.51
SNAI3Q3KNW1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNAI3Q3KNW1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.24■□□□□ 0.51
SNAI3Q3KNW1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNAI3Q3KNW1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNAI3Q3KNW1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNAI3Q3KNW1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.24■□□□□ 0.51
SNAI3Q3KNW1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
SNAI3Q3KNW1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.24■□□□□ 0.51
SNAI3Q3KNW1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNAI3Q3KNW1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.24■□□□□ 0.51
SNAI3Q3KNW1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNAI3Q3KNW1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.24■□□□□ 0.51
SNAI3Q3KNW1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.24■□□□□ 0.51
SNAI3Q3KNW1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNAI3Q3KNW1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNAI3Q3KNW1 AL049796.1-201ENST00000565336 1766 ntBASIC18.24■□□□□ 0.51
SNAI3Q3KNW1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SNAI3Q3KNW1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNAI3Q3KNW1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNAI3Q3KNW1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms