Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 HPR1YDR138W 2259 nt1.6□□□□□ -2.15
VPS13Q07878 MCM4YPR019W 2802 nt1.6□□□□□ -2.15
VPS13Q07878 PAP2YOL115W 1755 nt1.6□□□□□ -2.15
VPS13Q07878 SOL3YHR163W 750 nt1.6□□□□□ -2.15
VPS13Q07878 ENV10YLR065C 546 nt1.6□□□□□ -2.15
VPS13Q07878 EAF7YNL136W 1278 nt1.6□□□□□ -2.15
VPS13Q07878 YBL096CYBL096C 309 nt1.6□□□□□ -2.15
VPS13Q07878 YPK1YKL126W 2043 nt1.6□□□□□ -2.15
VPS13Q07878 GIP1YBR045C 1920 nt1.59□□□□□ -2.15
VPS13Q07878 YIL014C-AYIL014C-A 315 nt1.59□□□□□ -2.15
VPS13Q07878 HOP1YIL072W 1818 nt1.59□□□□□ -2.16
VPS13Q07878 CPA2YJR109C 3357 nt1.59□□□□□ -2.16
VPS13Q07878 CDC53YDL132W 2448 nt1.59□□□□□ -2.16
VPS13Q07878 YHR214C-BYHR214C-B 5382 nt1.59□□□□□ -2.16
VPS13Q07878 RPB11YOL005C 363 nt1.59□□□□□ -2.16
VPS13Q07878 SIN3YOL004W 4611 nt1.59□□□□□ -2.16
VPS13Q07878 HPC2YBR215W 1878 nt1.59□□□□□ -2.16
VPS13Q07878 TPS2YDR074W 2691 nt1.58□□□□□ -2.16
VPS13Q07878 CFT2YLR115W 2580 nt1.58□□□□□ -2.16
VPS13Q07878 YIL102CYIL102C 306 nt1.58□□□□□ -2.16
VPS13Q07878 PGS1YCL004W 1566 nt1.58□□□□□ -2.16
VPS13Q07878 SFB2YNL049C 2631 nt1.58□□□□□ -2.16
VPS13Q07878 VPS16YPL045W 2397 nt1.58□□□□□ -2.16
VPS13Q07878 LCB4YOR171C 1875 nt1.58□□□□□ -2.16
VPS13Q07878 PUF2YPR042C 3228 nt1.58□□□□□ -2.16
VPS13Q07878 RTS3YGR161C 792 nt1.57□□□□□ -2.16
VPS13Q07878 PEX17YNL214W 600 nt1.57□□□□□ -2.16
VPS13Q07878 HMT1YBR034C 1047 nt1.57□□□□□ -2.16
VPS13Q07878 YOR146WYOR146W 306 nt1.57□□□□□ -2.16
VPS13Q07878 HUA2YOR284W 732 nt1.57□□□□□ -2.16
VPS13Q07878 DYN2YDR424C 279 nt1.57□□□□□ -2.16
VPS13Q07878 YAL042C-AYAL042C-A 378 nt1.57□□□□□ -2.16
VPS13Q07878 YCL046WYCL046W 324 nt1.57□□□□□ -2.16
VPS13Q07878 CDC60YPL160W 3273 nt1.56□□□□□ -2.16
VPS13Q07878 YDR169C-AYDR169C-A 150 nt1.56□□□□□ -2.16
VPS13Q07878 RPL27BYDR471W 411 nt1.56□□□□□ -2.16
VPS13Q07878 YML094C-AYML094C-A 402 nt1.56□□□□□ -2.16
VPS13Q07878 RPA190YOR341W 4995 nt1.56□□□□□ -2.16
VPS13Q07878 NEL1YHR035W 1893 nt1.56□□□□□ -2.16
VPS13Q07878 PEP8YJL053W 1140 nt1.55□□□□□ -2.16
VPS13Q07878 COX2Q0250 756 nt1.55□□□□□ -2.16
VPS13Q07878 SCD6YPR129W 1050 nt1.55□□□□□ -2.16
VPS13Q07878 APA1YCL050C 966 nt1.55□□□□□ -2.16
VPS13Q07878 DOA4YDR069C 2781 nt1.55□□□□□ -2.16
VPS13Q07878 YIL166CYIL166C 1629 nt1.54□□□□□ -2.16
VPS13Q07878 SLM1YIL105C 2061 nt1.54□□□□□ -2.16
VPS13Q07878 FRE2YKL220C 2136 nt1.54□□□□□ -2.16
VPS13Q07878 DCP2YNL118C 2913 nt1.53□□□□□ -2.16
VPS13Q07878 PHO2YDL106C 1680 nt1.53□□□□□ -2.16
VPS13Q07878 CSH1YBR161W 1131 nt1.53□□□□□ -2.16
VPS13Q07878 MDM30YLR368W 1797 nt1.53□□□□□ -2.16
VPS13Q07878 YGL262WYGL262W 528 nt1.53□□□□□ -2.16
VPS13Q07878 YHR214C-CYHR214C-C 1437 nt1.53□□□□□ -2.16
VPS13Q07878 EDS1YBR033W 2760 nt1.53□□□□□ -2.16
VPS13Q07878 RNY1YPL123C 1305 nt1.53□□□□□ -2.16
VPS13Q07878 SXM1YDR395W 2835 nt1.53□□□□□ -2.17
VPS13Q07878 YOL098CYOL098C 3114 nt1.53□□□□□ -2.17
VPS13Q07878 HTD2YHR067W 843 nt1.53□□□□□ -2.17
VPS13Q07878 RSC3YDR303C 2658 nt1.52□□□□□ -2.17
VPS13Q07878 TIM18YOR297C 579 nt1.52□□□□□ -2.17
VPS13Q07878 YPR078CYPR078C 1119 nt1.52□□□□□ -2.17
VPS13Q07878 YEL1YBL060W 2064 nt1.52□□□□□ -2.17
VPS13Q07878 IRC10YOL015W 1761 nt1.52□□□□□ -2.17
VPS13Q07878 AEP2YMR282C 1743 nt1.52□□□□□ -2.17
VPS13Q07878 RMP1YLR145W 606 nt1.51□□□□□ -2.17
VPS13Q07878 PMT4YJR143C 2289 nt1.51□□□□□ -2.17
VPS13Q07878 YMR194C-AYMR194C-A 225 nt1.51□□□□□ -2.17
VPS13Q07878 YBR300CYBR300C 498 nt1.51□□□□□ -2.17
VPS13Q07878 SWR1YDR334W 4545 nt1.51□□□□□ -2.17
VPS13Q07878 RGR1YLR071C 3249 nt1.51□□□□□ -2.17
VPS13Q07878 RRF1YHR038W 693 nt1.51□□□□□ -2.17
VPS13Q07878 YKL091CYKL091C 933 nt1.51□□□□□ -2.17
VPS13Q07878 UBP2YOR124C 3819 nt1.51□□□□□ -2.17
VPS13Q07878 SKT5YBL061C 2091 nt1.5□□□□□ -2.17
VPS13Q07878 MET6YER091C 2304 nt1.5□□□□□ -2.17
VPS13Q07878 MPP10YJR002W 1782 nt1.5□□□□□ -2.17
VPS13Q07878 LDB17YDL146W 1476 nt1.5□□□□□ -2.17
VPS13Q07878 GNT1YOR320C 1476 nt1.5□□□□□ -2.17
VPS13Q07878 SPO14YKR031C 5052 nt1.5□□□□□ -2.17
VPS13Q07878 PFA5YDR459C 1125 nt1.5□□□□□ -2.17
VPS13Q07878 ADY4YLR227C 1482 nt1.5□□□□□ -2.17
VPS13Q07878 RSM25YIL093C 795 nt1.49□□□□□ -2.17
VPS13Q07878 UBP12YJL197W 3765 nt1.49□□□□□ -2.17
VPS13Q07878 CDC25YLR310C 4770 nt1.49□□□□□ -2.17
VPS13Q07878 ECM5YMR176W 4236 nt1.49□□□□□ -2.17
VPS13Q07878 MYO4YAL029C 4416 nt1.49□□□□□ -2.17
VPS13Q07878 NFI1YOR156C 2181 nt1.49□□□□□ -2.17
VPS13Q07878 FMN1YDR236C 657 nt1.49□□□□□ -2.17
VPS13Q07878 YHR071C-AYHR071C-A 321 nt1.49□□□□□ -2.17
VPS13Q07878 YDR124WYDR124W 975 nt1.48□□□□□ -2.17
VPS13Q07878 YGR130CYGR130C 2451 nt1.48□□□□□ -2.17
VPS13Q07878 ALB1YJL122W 528 nt1.48□□□□□ -2.17
VPS13Q07878 NPR3YHL023C 3441 nt1.48□□□□□ -2.17
VPS13Q07878 HFA1YMR207C 6372 nt1.48□□□□□ -2.17
VPS13Q07878 LSM6YDR378C 261 nt1.47□□□□□ -2.17
VPS13Q07878 YIL142C-AYIL142C-A 333 nt1.47□□□□□ -2.17
VPS13Q07878 MLP2YIL149C 5040 nt1.47□□□□□ -2.17
VPS13Q07878 ATG29YPL166W 642 nt1.47□□□□□ -2.17
VPS13Q07878 ECM29YHL030W 5607 nt1.47□□□□□ -2.17
VPS13Q07878 BCK2YER167W 2556 nt1.46□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 130.3 ms