Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 RPL19AYBR084C-A 570 nt4.22□□□□□ -1.73
SSL1Q04673 YBR242WYBR242W 717 nt4.22□□□□□ -1.73
SSL1Q04673 ASI3YNL008C 2031 nt4.22□□□□□ -1.73
SSL1Q04673 RAD52YML032C 1416 nt4.21□□□□□ -1.73
SSL1Q04673 RSC58YLR033W 1509 nt4.21□□□□□ -1.73
SSL1Q04673 GPP2YER062C 753 nt4.21□□□□□ -1.74
SSL1Q04673 SLX8YER116C 825 nt4.21□□□□□ -1.74
SSL1Q04673 PRM8YGL053W 714 nt4.21□□□□□ -1.74
SSL1Q04673 BUD13YGL174W 801 nt4.21□□□□□ -1.74
SSL1Q04673 RGI2YIL057C 495 nt4.21□□□□□ -1.74
SSL1Q04673 YKL070WYKL070W 510 nt4.21□□□□□ -1.74
SSL1Q04673 YAR047CYAR047C 321 nt4.21□□□□□ -1.74
SSL1Q04673 HRI1YLR301W 735 nt4.21□□□□□ -1.74
SSL1Q04673 YML003WYML003W 873 nt4.21□□□□□ -1.74
SSL1Q04673 YBR103C-AYBR103C-A 144 nt4.21□□□□□ -1.74
SSL1Q04673 snR41snR41 95 nt4.21□□□□□ -1.74
SSL1Q04673 UBP16YPL072W 1500 nt4.21□□□□□ -1.74
SSL1Q04673 PHM7YOL084W 2976 nt4.2□□□□□ -1.74
SSL1Q04673 BCK2YER167W 2556 nt4.2□□□□□ -1.74
SSL1Q04673 GCR1YPL075W 2358 nt4.2□□□□□ -1.74
SSL1Q04673 HOS3YPL116W 2094 nt4.2□□□□□ -1.74
SSL1Q04673 SWP82YFL049W 1872 nt4.2□□□□□ -1.74
SSL1Q04673 SNU56YDR240C 1479 nt4.2□□□□□ -1.74
SSL1Q04673 BRE4YDL231C 3378 nt4.2□□□□□ -1.74
SSL1Q04673 AVT5YBL089W 1380 nt4.2□□□□□ -1.74
SSL1Q04673 PMI40YER003C 1290 nt4.2□□□□□ -1.74
SSL1Q04673 RIM4YHL024W 2142 nt4.2□□□□□ -1.74
SSL1Q04673 YJL119CYJL119C 324 nt4.2□□□□□ -1.74
SSL1Q04673 CNB1YKL190W 528 nt4.2□□□□□ -1.74
SSL1Q04673 YKT6YKL196C 603 nt4.2□□□□□ -1.74
SSL1Q04673 FMP46YKR049C 402 nt4.2□□□□□ -1.74
SSL1Q04673 YLL044WYLL044W 447 nt4.2□□□□□ -1.74
SSL1Q04673 RPL15BYMR121C 615 nt4.2□□□□□ -1.74
SSL1Q04673 PBI2YNL015W 228 nt4.2□□□□□ -1.74
SSL1Q04673 YOL150CYOL150C 312 nt4.2□□□□□ -1.74
SSL1Q04673 YOR022CYOR022C 2148 nt4.2□□□□□ -1.74
SSL1Q04673 VHR1YIL056W 1923 nt4.2□□□□□ -1.74
SSL1Q04673 TSR1YDL060W 2367 nt4.2□□□□□ -1.74
SSL1Q04673 RRN11YML043C 1524 nt4.2□□□□□ -1.74
SSL1Q04673 YPR148CYPR148C 1308 nt4.2□□□□□ -1.74
SSL1Q04673 FAD1YDL045C 921 nt4.19□□□□□ -1.74
SSL1Q04673 RPP1AYDL081C 321 nt4.19□□□□□ -1.74
SSL1Q04673 YIL021C-AYIL021C-A 270 nt4.19□□□□□ -1.74
SSL1Q04673 YNL146WYNL146W 303 nt4.19□□□□□ -1.74
SSL1Q04673 YPL034WYPL034W 498 nt4.19□□□□□ -1.74
SSL1Q04673 ATG26YLR189C 3597 nt4.19□□□□□ -1.74
SSL1Q04673 TRM11YOL124C 1302 nt4.19□□□□□ -1.74
SSL1Q04673 KAP114YGL241W 3015 nt4.19□□□□□ -1.74
SSL1Q04673 NAM2YLR382C 2685 nt4.18□□□□□ -1.74
SSL1Q04673 TDA2YER071C 381 nt4.18□□□□□ -1.74
SSL1Q04673 ECL1YGR146C 636 nt4.18□□□□□ -1.74
SSL1Q04673 IES3YLR052W 753 nt4.18□□□□□ -1.74
SSL1Q04673 YNL150WYNL150W 408 nt4.18□□□□□ -1.74
SSL1Q04673 snR17asnR17a 333 nt4.18□□□□□ -1.74
SSL1Q04673 SVS1YPL163C 783 nt4.18□□□□□ -1.74
SSL1Q04673 MNN4YKL201C 3537 nt4.18□□□□□ -1.74
SSL1Q04673 PKP2YGL059W 1476 nt4.18□□□□□ -1.74
SSL1Q04673 HLR1YDR528W 1272 nt4.17□□□□□ -1.74
SSL1Q04673 HUR1YGL168W 333 nt4.17□□□□□ -1.74
SSL1Q04673 YIL014C-AYIL014C-A 315 nt4.17□□□□□ -1.74
SSL1Q04673 YIL171WYIL171W 330 nt4.17□□□□□ -1.74
SSL1Q04673 YML031C-AYML031C-A 336 nt4.17□□□□□ -1.74
SSL1Q04673 RPL18BYNL301C 561 nt4.17□□□□□ -1.74
SSL1Q04673 CAT5YOR125C 702 nt4.17□□□□□ -1.74
SSL1Q04673 YOR248WYOR248W 303 nt4.17□□□□□ -1.74
SSL1Q04673 PRP3YDR473C 1410 nt4.17□□□□□ -1.74
SSL1Q04673 ALR2YFL050C 2577 nt4.17□□□□□ -1.74
SSL1Q04673 AEP1YMR064W 1557 nt4.17□□□□□ -1.74
SSL1Q04673 GDH2YDL215C 3279 nt4.17□□□□□ -1.74
SSL1Q04673 UBP6YFR010W 1500 nt4.16□□□□□ -1.74
SSL1Q04673 YBR238CYBR238C 2196 nt4.16□□□□□ -1.74
SSL1Q04673 STP1YDR463W 1560 nt4.16□□□□□ -1.74
SSL1Q04673 COX4YGL187C 468 nt4.16□□□□□ -1.74
SSL1Q04673 RNP1YLL046C 750 nt4.16□□□□□ -1.74
SSL1Q04673 VPS63YLR261C 327 nt4.16□□□□□ -1.74
SSL1Q04673 SWC7YLR385C 399 nt4.16□□□□□ -1.74
SSL1Q04673 ASI2YNL159C 870 nt4.16□□□□□ -1.74
SSL1Q04673 YNL276CYNL276C 396 nt4.16□□□□□ -1.74
SSL1Q04673 MRPS9YBR146W 837 nt4.16□□□□□ -1.74
SSL1Q04673 FOX2YKR009C 2703 nt4.16□□□□□ -1.74
SSL1Q04673 TCO89YPL180W 2400 nt4.16□□□□□ -1.74
SSL1Q04673 CYM1YDR430C 2970 nt4.16□□□□□ -1.74
SSL1Q04673 RPG1YBR079C 2895 nt4.16□□□□□ -1.74
SSL1Q04673 PEP5YMR231W 3090 nt4.15□□□□□ -1.75
SSL1Q04673 YDR269CYDR269C 324 nt4.15□□□□□ -1.75
SSL1Q04673 NTF2YER009W 378 nt4.15□□□□□ -1.75
SSL1Q04673 YGR039WYGR039W 312 nt4.15□□□□□ -1.75
SSL1Q04673 tQ(UUG)CtQ(UUG)C 72 nt4.15□□□□□ -1.75
SSL1Q04673 tQ(UUG)D1tQ(UUG)D1 72 nt4.15□□□□□ -1.75
SSL1Q04673 tQ(UUG)D2tQ(UUG)D2 72 nt4.15□□□□□ -1.75
SSL1Q04673 tQ(UUG)D3tQ(UUG)D3 72 nt4.15□□□□□ -1.75
SSL1Q04673 tQ(UUG)E1tQ(UUG)E1 72 nt4.15□□□□□ -1.75
SSL1Q04673 tQ(UUG)HtQ(UUG)H 72 nt4.15□□□□□ -1.75
SSL1Q04673 tQ(UUG)LtQ(UUG)L 72 nt4.15□□□□□ -1.75
SSL1Q04673 SPO13YHR014W 876 nt4.15□□□□□ -1.75
SSL1Q04673 YIR036W-AYIR036W-A 402 nt4.15□□□□□ -1.75
SSL1Q04673 SDO1YLR022C 753 nt4.15□□□□□ -1.75
SSL1Q04673 YML084WYML084W 309 nt4.15□□□□□ -1.75
SSL1Q04673 YMR153C-AYMR153C-A 336 nt4.15□□□□□ -1.75
SSL1Q04673 GPI15YNL038W 690 nt4.15□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 17.2 ms