Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
PHC1P78364 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHC1P78364 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHC1P78364 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHC1P78364 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHC1P78364 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHC1P78364 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PHC1P78364 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHC1P78364 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHC1P78364 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHC1P78364 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHC1P78364 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHC1P78364 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.05■□□□□ 0.8
PHC1P78364 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHC1P78364 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHC1P78364 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
PHC1P78364 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHC1P78364 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PHC1P78364 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHC1P78364 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PHC1P78364 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PHC1P78364 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PHC1P78364 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHC1P78364 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHC1P78364 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.04■□□□□ 0.8
PHC1P78364 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHC1P78364 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.04■□□□□ 0.8
PHC1P78364 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PHC1P78364 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PHC1P78364 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PHC1P78364 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHC1P78364 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PHC1P78364 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.04■□□□□ 0.8
PHC1P78364 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.04■□□□□ 0.8
PHC1P78364 AC024257.2-201ENST00000549699 147 ntBASIC20.04■□□□□ 0.8
PHC1P78364 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHC1P78364 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PHC1P78364 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHC1P78364 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.03■□□□□ 0.8
PHC1P78364 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHC1P78364 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHC1P78364 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHC1P78364 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHC1P78364 AC233992.3-201ENST00000607491 485 ntBASIC20.03■□□□□ 0.8
PHC1P78364 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHC1P78364 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PHC1P78364 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHC1P78364 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.03■□□□□ 0.8
PHC1P78364 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PHC1P78364 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHC1P78364 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHC1P78364 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PHC1P78364 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.03■□□□□ 0.8
PHC1P78364 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PHC1P78364 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHC1P78364 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PHC1P78364 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHC1P78364 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PHC1P78364 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PHC1P78364 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PHC1P78364 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHC1P78364 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PHC1P78364 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PHC1P78364 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PHC1P78364 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PHC1P78364 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PHC1P78364 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PHC1P78364 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PHC1P78364 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.02■□□□□ 0.79
PHC1P78364 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PHC1P78364 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHC1P78364 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.01■□□□□ 0.79
PHC1P78364 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PHC1P78364 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHC1P78364 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PHC1P78364 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PHC1P78364 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.01■□□□□ 0.79
PHC1P78364 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.01■□□□□ 0.79
PHC1P78364 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.01■□□□□ 0.79
PHC1P78364 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.01■□□□□ 0.79
PHC1P78364 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.01■□□□□ 0.79
PHC1P78364 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.01■□□□□ 0.79
PHC1P78364 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHC1P78364 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20■□□□□ 0.79
PHC1P78364 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20■□□□□ 0.79
PHC1P78364 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20■□□□□ 0.79
PHC1P78364 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHC1P78364 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PHC1P78364 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHC1P78364 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHC1P78364 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20■□□□□ 0.79
PHC1P78364 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHC1P78364 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20■□□□□ 0.79
PHC1P78364 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
PHC1P78364 AL136162.1-201ENST00000607711 1078 ntBASIC20■□□□□ 0.79
PHC1P78364 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PHC1P78364 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PHC1P78364 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHC1P78364 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20■□□□□ 0.79
PHC1P78364 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms