Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RPS3AP61247 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RPS3AP61247 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
RPS3AP61247 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RPS3AP61247 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPS3AP61247 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RPS3AP61247 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPS3AP61247 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPS3AP61247 AC010141.3-201ENST00000456659 717 ntBASIC19.64■□□□□ 0.73
RPS3AP61247 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
RPS3AP61247 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPS3AP61247 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPS3AP61247 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.64■□□□□ 0.73
RPS3AP61247 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RPS3AP61247 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS3AP61247 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
RPS3AP61247 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS3AP61247 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPS3AP61247 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS3AP61247 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPS3AP61247 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS3AP61247 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS3AP61247 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.63■□□□□ 0.73
RPS3AP61247 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.63■□□□□ 0.73
RPS3AP61247 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.63■□□□□ 0.73
RPS3AP61247 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.63■□□□□ 0.73
RPS3AP61247 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
RPS3AP61247 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPS3AP61247 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.63■□□□□ 0.73
RPS3AP61247 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.63■□□□□ 0.73
RPS3AP61247 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.63■□□□□ 0.73
RPS3AP61247 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS3AP61247 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPS3AP61247 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RPS3AP61247 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.62■□□□□ 0.73
RPS3AP61247 AL358852.1-201ENST00000623174 1268 ntBASIC19.62■□□□□ 0.73
RPS3AP61247 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.62■□□□□ 0.73
RPS3AP61247 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RPS3AP61247 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS3AP61247 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPS3AP61247 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RPS3AP61247 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS3AP61247 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS3AP61247 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPS3AP61247 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS3AP61247 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RPS3AP61247 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.61■□□□□ 0.73
RPS3AP61247 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS3AP61247 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPS3AP61247 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.61■□□□□ 0.73
RPS3AP61247 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.61■□□□□ 0.73
RPS3AP61247 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.61■□□□□ 0.73
RPS3AP61247 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.61■□□□□ 0.73
RPS3AP61247 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.61■□□□□ 0.73
RPS3AP61247 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS3AP61247 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RPS3AP61247 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS3AP61247 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS3AP61247 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.61■□□□□ 0.73
RPS3AP61247 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS3AP61247 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS3AP61247 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.61■□□□□ 0.73
RPS3AP61247 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPS3AP61247 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS3AP61247 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS3AP61247 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPS3AP61247 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPS3AP61247 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.6■□□□□ 0.73
RPS3AP61247 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RPS3AP61247 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.6■□□□□ 0.73
RPS3AP61247 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPS3AP61247 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPS3AP61247 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPS3AP61247 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPS3AP61247 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.6■□□□□ 0.73
RPS3AP61247 AL354811.1-201ENST00000610286 706 ntBASIC19.6■□□□□ 0.73
RPS3AP61247 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RPS3AP61247 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPS3AP61247 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.6■□□□□ 0.73
RPS3AP61247 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPS3AP61247 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RPS3AP61247 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RPS3AP61247 AL157384.1-201ENST00000445995 2473 ntBASIC19.59■□□□□ 0.73
RPS3AP61247 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.59■□□□□ 0.73
RPS3AP61247 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS3AP61247 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS3AP61247 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS3AP61247 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPS3AP61247 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.59■□□□□ 0.73
RPS3AP61247 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.59■□□□□ 0.73
RPS3AP61247 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.59■□□□□ 0.73
RPS3AP61247 AC105233.4-201ENST00000642045 216 ntBASIC19.59■□□□□ 0.73
RPS3AP61247 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPS3AP61247 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS3AP61247 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS3AP61247 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.59■□□□□ 0.73
RPS3AP61247 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RPS3AP61247 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RPS3AP61247 LINC01960-201ENST00000563759 1884 ntBASIC19.58■□□□□ 0.73
RPS3AP61247 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms