Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPCS3P61009 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPCS3P61009 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPCS3P61009 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SPCS3P61009 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SPCS3P61009 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPCS3P61009 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPCS3P61009 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPCS3P61009 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.07■□□□□ 0.32
SPCS3P61009 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SPCS3P61009 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPCS3P61009 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.07■□□□□ 0.32
SPCS3P61009 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPCS3P61009 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPCS3P61009 LINC01521-201ENST00000504184 1943 ntBASIC17.07■□□□□ 0.32
SPCS3P61009 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.07■□□□□ 0.32
SPCS3P61009 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.07■□□□□ 0.32
SPCS3P61009 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPCS3P61009 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPCS3P61009 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPCS3P61009 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SPCS3P61009 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPCS3P61009 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SPCS3P61009 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPCS3P61009 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPCS3P61009 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPCS3P61009 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPCS3P61009 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.06■□□□□ 0.32
SPCS3P61009 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.06■□□□□ 0.32
SPCS3P61009 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPCS3P61009 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPCS3P61009 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SPCS3P61009 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPCS3P61009 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPCS3P61009 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPCS3P61009 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPCS3P61009 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPCS3P61009 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.06■□□□□ 0.32
SPCS3P61009 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPCS3P61009 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPCS3P61009 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SPCS3P61009 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPCS3P61009 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
SPCS3P61009 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SPCS3P61009 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.05■□□□□ 0.32
SPCS3P61009 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPCS3P61009 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPCS3P61009 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPCS3P61009 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPCS3P61009 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SPCS3P61009 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPCS3P61009 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPCS3P61009 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SPCS3P61009 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPCS3P61009 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPCS3P61009 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPCS3P61009 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPCS3P61009 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPCS3P61009 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.05■□□□□ 0.32
SPCS3P61009 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPCS3P61009 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SPCS3P61009 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPCS3P61009 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SPCS3P61009 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPCS3P61009 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
SPCS3P61009 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.04■□□□□ 0.32
SPCS3P61009 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPCS3P61009 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPCS3P61009 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPCS3P61009 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SPCS3P61009 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.04■□□□□ 0.32
SPCS3P61009 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SPCS3P61009 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.04■□□□□ 0.32
SPCS3P61009 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPCS3P61009 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPCS3P61009 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPCS3P61009 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SPCS3P61009 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPCS3P61009 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPCS3P61009 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPCS3P61009 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.04■□□□□ 0.32
SPCS3P61009 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
SPCS3P61009 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPCS3P61009 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SPCS3P61009 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SPCS3P61009 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPCS3P61009 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPCS3P61009 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPCS3P61009 AL049796.1-201ENST00000565336 1766 ntBASIC17.03■□□□□ 0.32
SPCS3P61009 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPCS3P61009 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.03■□□□□ 0.32
SPCS3P61009 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SPCS3P61009 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.03■□□□□ 0.32
SPCS3P61009 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SPCS3P61009 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.03■□□□□ 0.32
SPCS3P61009 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPCS3P61009 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPCS3P61009 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SPCS3P61009 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPCS3P61009 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms