Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3S2P59780 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
AP3S2P59780 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3S2P59780 AIRN-201ENST00000601203 4374 ntBASIC18.08■□□□□ 0.48
AP3S2P59780 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.08■□□□□ 0.48
AP3S2P59780 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
AP3S2P59780 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.08■□□□□ 0.48
AP3S2P59780 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S2P59780 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S2P59780 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.07■□□□□ 0.48
AP3S2P59780 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S2P59780 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S2P59780 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.07■□□□□ 0.48
AP3S2P59780 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S2P59780 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S2P59780 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S2P59780 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S2P59780 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S2P59780 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
AP3S2P59780 AC139795.1-202ENST00000500444 432 ntBASIC18.07■□□□□ 0.48
AP3S2P59780 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
AP3S2P59780 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.07■□□□□ 0.48
AP3S2P59780 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S2P59780 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.07■□□□□ 0.48
AP3S2P59780 MIR7108-201ENST00000614319 87 ntBASIC18.07■□□□□ 0.48
AP3S2P59780 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.07■□□□□ 0.48
AP3S2P59780 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S2P59780 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S2P59780 AC073314.1-201ENST00000568729 2216 ntBASIC18.07■□□□□ 0.48
AP3S2P59780 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S2P59780 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.07■□□□□ 0.48
AP3S2P59780 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
AP3S2P59780 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
AP3S2P59780 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.06■□□□□ 0.48
AP3S2P59780 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S2P59780 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.06■□□□□ 0.48
AP3S2P59780 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S2P59780 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S2P59780 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S2P59780 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S2P59780 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S2P59780 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.06■□□□□ 0.48
AP3S2P59780 AC079089.2-201ENST00000531211 1277 ntBASIC18.06■□□□□ 0.48
AP3S2P59780 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.06■□□□□ 0.48
AP3S2P59780 HCG11-201ENST00000411553 5696 ntBASIC18.06■□□□□ 0.48
AP3S2P59780 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S2P59780 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S2P59780 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.06■□□□□ 0.48
AP3S2P59780 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.06■□□□□ 0.48
AP3S2P59780 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.06■□□□□ 0.48
AP3S2P59780 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S2P59780 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S2P59780 AL391422.3-201ENST00000603791 2761 ntBASIC18.06■□□□□ 0.48
AP3S2P59780 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.06■□□□□ 0.48
AP3S2P59780 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S2P59780 OR7E47P-201ENST00000546390 1422 ntBASIC18.06■□□□□ 0.48
AP3S2P59780 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
AP3S2P59780 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S2P59780 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.05■□□□□ 0.48
AP3S2P59780 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.05■□□□□ 0.48
AP3S2P59780 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.05■□□□□ 0.48
AP3S2P59780 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S2P59780 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.05■□□□□ 0.48
AP3S2P59780 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.05■□□□□ 0.48
AP3S2P59780 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.05■□□□□ 0.48
AP3S2P59780 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S2P59780 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
AP3S2P59780 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S2P59780 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
AP3S2P59780 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S2P59780 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S2P59780 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S2P59780 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.05■□□□□ 0.48
AP3S2P59780 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.05■□□□□ 0.48
AP3S2P59780 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S2P59780 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S2P59780 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S2P59780 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
AP3S2P59780 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
AP3S2P59780 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S2P59780 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
AP3S2P59780 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S2P59780 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S2P59780 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S2P59780 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.05■□□□□ 0.48
AP3S2P59780 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S2P59780 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.05■□□□□ 0.48
AP3S2P59780 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
AP3S2P59780 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3S2P59780 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.04■□□□□ 0.48
AP3S2P59780 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP3S2P59780 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3S2P59780 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3S2P59780 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3S2P59780 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3S2P59780 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.04■□□□□ 0.48
AP3S2P59780 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP3S2P59780 RNF126P1-201ENST00000567452 1320 ntBASIC18.04■□□□□ 0.48
AP3S2P59780 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.04■□□□□ 0.48
AP3S2P59780 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms