Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 YGR064WYGR064W 369 nt2.81□□□□□ -1.96
YNL040WP53960 YIL102C-AYIL102C-A 228 nt2.81□□□□□ -1.96
YNL040WP53960 IME1YJR094C 1083 nt2.81□□□□□ -1.96
YNL040WP53960 TRM112YNR046W 408 nt2.81□□□□□ -1.96
YNL040WP53960 YOR331CYOR331C 558 nt2.81□□□□□ -1.96
YNL040WP53960 TFB6YOR352W 1032 nt2.81□□□□□ -1.96
YNL040WP53960 RPS12YOR369C 432 nt2.81□□□□□ -1.96
YNL040WP53960 MRP2YPR166C 348 nt2.81□□□□□ -1.96
YNL040WP53960 RRP7YCL031C 894 nt2.81□□□□□ -1.96
YNL040WP53960 TIF4631YGR162W 2859 nt2.81□□□□□ -1.96
YNL040WP53960 FRE8YLR047C 2061 nt2.8□□□□□ -1.96
YNL040WP53960 TEC1YBR083W 1461 nt2.8□□□□□ -1.96
YNL040WP53960 YEL075CYEL075C 369 nt2.8□□□□□ -1.96
YNL040WP53960 YER165C-AYER165C-A 357 nt2.8□□□□□ -1.96
YNL040WP53960 YGR121W-AYGR121W-A 216 nt2.8□□□□□ -1.96
YNL040WP53960 YHR086W-AYHR086W-A 162 nt2.8□□□□□ -1.96
YNL040WP53960 RIF2YLR453C 1188 nt2.8□□□□□ -1.96
YNL040WP53960 RPS10AYOR293W 318 nt2.8□□□□□ -1.96
YNL040WP53960 VIP1YLR410W 3441 nt2.8□□□□□ -1.96
YNL040WP53960 MDV1YJL112W 2145 nt2.8□□□□□ -1.96
YNL040WP53960 VAS1YGR094W 3315 nt2.8□□□□□ -1.96
YNL040WP53960 WHI3YNL197C 1986 nt2.8□□□□□ -1.96
YNL040WP53960 SLP1YOR154W 1764 nt2.79□□□□□ -1.96
YNL040WP53960 SRO77YBL106C 3033 nt2.79□□□□□ -1.96
YNL040WP53960 RTT10YPL183C 3042 nt2.79□□□□□ -1.96
YNL040WP53960 ARI1YGL157W 1044 nt2.79□□□□□ -1.96
YNL040WP53960 YGR039WYGR039W 312 nt2.79□□□□□ -1.96
YNL040WP53960 CPR7YJR032W 1182 nt2.79□□□□□ -1.96
YNL040WP53960 YLR154C-HYLR154C-H 132 nt2.79□□□□□ -1.96
YNL040WP53960 YLR156C-AYLR156C-A 132 nt2.79□□□□□ -1.96
YNL040WP53960 YLR157C-CYLR157C-C 132 nt2.79□□□□□ -1.96
YNL040WP53960 YLR159C-AYLR159C-A 132 nt2.79□□□□□ -1.96
YNL040WP53960 YNL184CYNL184C 327 nt2.79□□□□□ -1.96
YNL040WP53960 YOL118CYOL118C 309 nt2.79□□□□□ -1.96
YNL040WP53960 VAM3YOR106W 852 nt2.79□□□□□ -1.96
YNL040WP53960 YPL150WYPL150W 2706 nt2.79□□□□□ -1.96
YNL040WP53960 LCB4YOR171C 1875 nt2.79□□□□□ -1.96
YNL040WP53960 VAC14YLR386W 2643 nt2.78□□□□□ -1.96
YNL040WP53960 FLO11YIR019C 4104 nt2.78□□□□□ -1.96
YNL040WP53960 NDT80YHR124W 1884 nt2.78□□□□□ -1.96
YNL040WP53960 RRP14YKL082C 1305 nt2.78□□□□□ -1.96
YNL040WP53960 RRP42YDL111C 798 nt2.78□□□□□ -1.96
YNL040WP53960 HTA1YDR225W 399 nt2.78□□□□□ -1.96
YNL040WP53960 RPS25AYGR027C 327 nt2.78□□□□□ -1.96
YNL040WP53960 SDP1YIL113W 630 nt2.78□□□□□ -1.96
YNL040WP53960 ARC19YKL013C 516 nt2.78□□□□□ -1.96
YNL040WP53960 YML090WYML090W 387 nt2.78□□□□□ -1.96
YNL040WP53960 MTG1YMR097C 1104 nt2.78□□□□□ -1.96
YNL040WP53960 DUG3YNL191W 1074 nt2.78□□□□□ -1.96
YNL040WP53960 TOM1YDR457W 9807 nt2.78□□□□□ -1.96
YNL040WP53960 YHR078WYHR078W 1659 nt2.78□□□□□ -1.96
YNL040WP53960 CIN1YOR349W 3045 nt2.78□□□□□ -1.96
YNL040WP53960 TCB2YNL087W 3537 nt2.77□□□□□ -1.97
YNL040WP53960 YCR016WYCR016W 873 nt2.77□□□□□ -1.97
YNL040WP53960 AIM11YER093C-A 414 nt2.77□□□□□ -1.97
YNL040WP53960 YER138W-AYER138W-A 105 nt2.77□□□□□ -1.97
YNL040WP53960 YGR114CYGR114C 390 nt2.77□□□□□ -1.97
YNL040WP53960 ARG3YJL088W 1017 nt2.77□□□□□ -1.97
YNL040WP53960 RPS21BYJL136C 264 nt2.77□□□□□ -1.97
YNL040WP53960 YBL107W-AYBL107W-A 105 nt2.77□□□□□ -1.97
YNL040WP53960 SAP1YER047C 2694 nt2.77□□□□□ -1.97
YNL040WP53960 YPP1YGR198W 2454 nt2.77□□□□□ -1.97
YNL040WP53960 RED1YLR263W 2484 nt2.77□□□□□ -1.97
YNL040WP53960 RSE1YML049C 4086 nt2.77□□□□□ -1.97
YNL040WP53960 SST2YLR452C 2097 nt2.77□□□□□ -1.97
YNL040WP53960 SPH1YLR313C 1593 nt2.76□□□□□ -1.97
YNL040WP53960 PRP18YGR006W 756 nt2.76□□□□□ -1.97
YNL040WP53960 YHR097CYHR097C 1101 nt2.76□□□□□ -1.97
YNL040WP53960 SYS1YJL004C 612 nt2.76□□□□□ -1.97
YNL040WP53960 SWD2YKL018W 990 nt2.76□□□□□ -1.97
YNL040WP53960 YLR163W-AYLR163W-A 114 nt2.76□□□□□ -1.97
YNL040WP53960 MRPS8YMR158W 468 nt2.76□□□□□ -1.97
YNL040WP53960 MCT1YOR221C 1083 nt2.76□□□□□ -1.97
YNL040WP53960 PHO88YBR106W 567 nt2.76□□□□□ -1.97
YNL040WP53960 CSH1YBR161W 1131 nt2.76□□□□□ -1.97
YNL040WP53960 VPS64YDR200C 1815 nt2.76□□□□□ -1.97
YNL040WP53960 RIF1YBR275C 5751 nt2.76□□□□□ -1.97
YNL040WP53960 AYT1YLL063C 1425 nt2.76□□□□□ -1.97
YNL040WP53960 UBP8YMR223W 1416 nt2.76□□□□□ -1.97
YNL040WP53960 CAF120YNL278W 3183 nt2.75□□□□□ -1.97
YNL040WP53960 YIL082W-AYIL082W-A 4497 nt2.75□□□□□ -1.97
YNL040WP53960 YDR320W-BYDR320W-B 138 nt2.75□□□□□ -1.97
YNL040WP53960 YIR023C-AYIR023C-A 324 nt2.75□□□□□ -1.97
YNL040WP53960 ALB1YJL122W 528 nt2.75□□□□□ -1.97
YNL040WP53960 YJR056CYJR056C 711 nt2.75□□□□□ -1.97
YNL040WP53960 HYM1YKL189W 1200 nt2.75□□□□□ -1.97
YNL040WP53960 COQ9YLR201C 783 nt2.75□□□□□ -1.97
YNL040WP53960 ATG19YOL082W 1248 nt2.75□□□□□ -1.97
YNL040WP53960 LCL1YPL056C 306 nt2.75□□□□□ -1.97
YNL040WP53960 PIN3YPR154W 648 nt2.75□□□□□ -1.97
YNL040WP53960 CDC5YMR001C 2118 nt2.74□□□□□ -1.97
YNL040WP53960 BCK1YJL095W 4437 nt2.74□□□□□ -1.97
YNL040WP53960 ARF1YDL192W 546 nt2.74□□□□□ -1.97
YNL040WP53960 ECM11YDR446W 909 nt2.74□□□□□ -1.97
YNL040WP53960 SPT15YER148W 723 nt2.74□□□□□ -1.97
YNL040WP53960 GPI14YJR013W 1212 nt2.74□□□□□ -1.97
YNL040WP53960 YAL031W-AYAL031W-A 309 nt2.74□□□□□ -1.97
YNL040WP53960 YLR230WYLR230W 306 nt2.74□□□□□ -1.97
YNL040WP53960 YBL028CYBL028C 321 nt2.74□□□□□ -1.97
YNL040WP53960 SSU72YNL222W 621 nt2.74□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 19.4 ms