Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 YLR352WYLR352W 2424 nt3.32□□□□□ -1.88
RPT4P53549 SIN3YOL004W 4611 nt3.32□□□□□ -1.88
RPT4P53549 DNA2YHR164C 4569 nt3.31□□□□□ -1.88
RPT4P53549 ATP25YMR098C 1839 nt3.31□□□□□ -1.88
RPT4P53549 HTA1YDR225W 399 nt3.31□□□□□ -1.88
RPT4P53549 VFA1YER128W 612 nt3.31□□□□□ -1.88
RPT4P53549 YHR214C-EYHR214C-E 300 nt3.31□□□□□ -1.88
RPT4P53549 ATG27YJL178C 816 nt3.31□□□□□ -1.88
RPT4P53549 POL32YJR043C 1053 nt3.31□□□□□ -1.88
RPT4P53549 SDH3YKL141W 597 nt3.31□□□□□ -1.88
RPT4P53549 NEJ1YLR265C 1029 nt3.31□□□□□ -1.88
RPT4P53549 YAR070CYAR070C 300 nt3.31□□□□□ -1.88
RPT4P53549 SSU72YNL222W 621 nt3.31□□□□□ -1.88
RPT4P53549 PEX11YOL147C 711 nt3.31□□□□□ -1.88
RPT4P53549 DCP1YOL149W 696 nt3.31□□□□□ -1.88
RPT4P53549 SEC15YGL233W 2733 nt3.3□□□□□ -1.88
RPT4P53549 FUN30YAL019W 3396 nt3.3□□□□□ -1.88
RPT4P53549 YGR237CYGR237C 2358 nt3.3□□□□□ -1.88
RPT4P53549 RPL22BYFL034C-A 369 nt3.3□□□□□ -1.88
RPT4P53549 RPL1BYGL135W 654 nt3.3□□□□□ -1.88
RPT4P53549 SPT4YGR063C 309 nt3.3□□□□□ -1.88
RPT4P53549 YLR297WYLR297W 390 nt3.3□□□□□ -1.88
RPT4P53549 YLR416CYLR416C 399 nt3.3□□□□□ -1.88
RPT4P53549 YBL028CYBL028C 321 nt3.3□□□□□ -1.88
RPT4P53549 TYE7YOR344C 876 nt3.3□□□□□ -1.88
RPT4P53549 RPL1AYPL220W 654 nt3.3□□□□□ -1.88
RPT4P53549 RPL36BYPL249C-A 303 nt3.3□□□□□ -1.88
RPT4P53549 YPL216WYPL216W 3309 nt3.29□□□□□ -1.88
RPT4P53549 ITT1YML068W 1395 nt3.29□□□□□ -1.88
RPT4P53549 PMR1YGL167C 2853 nt3.29□□□□□ -1.88
RPT4P53549 MGT1YDL200C 567 nt3.29□□□□□ -1.88
RPT4P53549 RPN9YDR427W 1182 nt3.29□□□□□ -1.88
RPT4P53549 YEL010WYEL010W 351 nt3.29□□□□□ -1.88
RPT4P53549 RGI1YER067W 486 nt3.29□□□□□ -1.88
RPT4P53549 MPS2YGL075C 1164 nt3.29□□□□□ -1.88
RPT4P53549 LIF1YGL090W 1266 nt3.29□□□□□ -1.88
RPT4P53549 YHR182C-AYHR182C-A 474 nt3.29□□□□□ -1.88
RPT4P53549 IME1YJR094C 1083 nt3.29□□□□□ -1.88
RPT4P53549 TVP18YMR071C 504 nt3.29□□□□□ -1.88
RPT4P53549 PEX15YOL044W 1152 nt3.29□□□□□ -1.88
RPT4P53549 HHF1YBR009C 312 nt3.29□□□□□ -1.88
RPT4P53549 DIM1YPL266W 957 nt3.29□□□□□ -1.88
RPT4P53549 SET1YHR119W 3243 nt3.29□□□□□ -1.88
RPT4P53549 RAD5YLR032W 3510 nt3.29□□□□□ -1.88
RPT4P53549 GCD2YGR083C 1956 nt3.29□□□□□ -1.88
RPT4P53549 YMR018WYMR018W 1545 nt3.29□□□□□ -1.88
RPT4P53549 FLO9YAL063C 3969 nt3.28□□□□□ -1.88
RPT4P53549 HRD1YOL013C 1656 nt3.28□□□□□ -1.88
RPT4P53549 PET54YGR222W 882 nt3.28□□□□□ -1.88
RPT4P53549 CCE1YKL011C 1062 nt3.28□□□□□ -1.88
RPT4P53549 YKT6YKL196C 603 nt3.28□□□□□ -1.88
RPT4P53549 PAU23YLR037C 375 nt3.28□□□□□ -1.88
RPT4P53549 SMD3YLR147C 306 nt3.28□□□□□ -1.88
RPT4P53549 YLR347W-AYLR347W-A 141 nt3.28□□□□□ -1.88
RPT4P53549 YLR365WYLR365W 333 nt3.28□□□□□ -1.88
RPT4P53549 VIP1YLR410W 3441 nt3.28□□□□□ -1.88
RPT4P53549 FLO1YAR050W 4614 nt3.28□□□□□ -1.89
RPT4P53549 SLY41YOR307C 1362 nt3.27□□□□□ -1.89
RPT4P53549 PSP1YDR505C 2526 nt3.27□□□□□ -1.89
RPT4P53549 YEL075CYEL075C 369 nt3.27□□□□□ -1.89
RPT4P53549 GPN3YLR243W 819 nt3.27□□□□□ -1.89
RPT4P53549 BET5YML077W 480 nt3.27□□□□□ -1.89
RPT4P53549 MRPL17YNL252C 846 nt3.27□□□□□ -1.89
RPT4P53549 YNR062CYNR062C 984 nt3.27□□□□□ -1.89
RPT4P53549 SGT1YOR057W 1188 nt3.27□□□□□ -1.89
RPT4P53549 YOR203WYOR203W 354 nt3.27□□□□□ -1.89
RPT4P53549 TUM1YOR251C 915 nt3.27□□□□□ -1.89
RPT4P53549 snR43snR43 209 nt3.27□□□□□ -1.89
RPT4P53549 DRS2YAL026C 4068 nt3.27□□□□□ -1.89
RPT4P53549 STT4YLR305C 5703 nt3.26□□□□□ -1.89
RPT4P53549 SMT3YDR510W 306 nt3.26□□□□□ -1.89
RPT4P53549 YFR010W-AYFR010W-A 189 nt3.26□□□□□ -1.89
RPT4P53549 YGR053CYGR053C 852 nt3.26□□□□□ -1.89
RPT4P53549 YJR037WYJR037W 384 nt3.26□□□□□ -1.89
RPT4P53549 POL30YBR088C 777 nt3.26□□□□□ -1.89
RPT4P53549 GCD6YDR211W 2139 nt3.26□□□□□ -1.89
RPT4P53549 COM2YER130C 1332 nt3.25□□□□□ -1.89
RPT4P53549 DUN1YDL101C 1542 nt3.25□□□□□ -1.89
RPT4P53549 BEM4YPL161C 1902 nt3.25□□□□□ -1.89
RPT4P53549 DPP1YDR284C 870 nt3.25□□□□□ -1.89
RPT4P53549 PEA2YER149C 1263 nt3.25□□□□□ -1.89
RPT4P53549 RPB9YGL070C 369 nt3.25□□□□□ -1.89
RPT4P53549 YGL242CYGL242C 546 nt3.25□□□□□ -1.89
RPT4P53549 BRR6YGL247W 594 nt3.25□□□□□ -1.89
RPT4P53549 RPL24BYGR148C 468 nt3.25□□□□□ -1.89
RPT4P53549 RPL17AYKL180W 555 nt3.25□□□□□ -1.89
RPT4P53549 NNT1YLR285W 786 nt3.25□□□□□ -1.89
RPT4P53549 SFH1YLR321C 1281 nt3.25□□□□□ -1.89
RPT4P53549 YLR400WYLR400W 474 nt3.25□□□□□ -1.89
RPT4P53549 RPL13BYMR142C 600 nt3.25□□□□□ -1.89
RPT4P53549 RPL33AYPL143W 324 nt3.25□□□□□ -1.89
RPT4P53549 PHO81YGR233C 3537 nt3.25□□□□□ -1.89
RPT4P53549 VPS9YML097C 1356 nt3.25□□□□□ -1.89
RPT4P53549 YDR491CYDR491C 492 nt3.24□□□□□ -1.89
RPT4P53549 GEP7YGL057C 864 nt3.24□□□□□ -1.89
RPT4P53549 YGR039WYGR039W 312 nt3.24□□□□□ -1.89
RPT4P53549 VMA5YKL080W 1179 nt3.24□□□□□ -1.89
RPT4P53549 YKL131WYKL131W 522 nt3.24□□□□□ -1.89
RPT4P53549 YAL064WYAL064W 285 nt3.24□□□□□ -1.89
RPT4P53549 YMR158C-AYMR158C-A 138 nt3.24□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 29.6 ms