Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.29■□□□□ 0.52
GDNFP39905 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
GDNFP39905 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDNFP39905 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.29■□□□□ 0.52
GDNFP39905 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
GDNFP39905 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDNFP39905 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
GDNFP39905 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDNFP39905 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDNFP39905 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDNFP39905 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.28■□□□□ 0.52
GDNFP39905 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GDNFP39905 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.28■□□□□ 0.52
GDNFP39905 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.28■□□□□ 0.52
GDNFP39905 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.28■□□□□ 0.52
GDNFP39905 MIR4466-201ENST00000606121 54 ntBASIC18.28■□□□□ 0.52
GDNFP39905 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDNFP39905 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.28■□□□□ 0.52
GDNFP39905 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDNFP39905 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.28■□□□□ 0.52
GDNFP39905 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
GDNFP39905 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDNFP39905 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.28■□□□□ 0.52
GDNFP39905 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
GDNFP39905 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.28■□□□□ 0.52
GDNFP39905 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDNFP39905 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
GDNFP39905 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.27■□□□□ 0.52
GDNFP39905 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GDNFP39905 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDNFP39905 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDNFP39905 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDNFP39905 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.27■□□□□ 0.52
GDNFP39905 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDNFP39905 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.27■□□□□ 0.52
GDNFP39905 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDNFP39905 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
GDNFP39905 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GDNFP39905 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDNFP39905 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDNFP39905 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDNFP39905 AC006455.2-201ENST00000429931 906 ntBASIC18.27■□□□□ 0.52
GDNFP39905 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.27■□□□□ 0.52
GDNFP39905 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.27■□□□□ 0.52
GDNFP39905 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.27■□□□□ 0.52
GDNFP39905 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.27■□□□□ 0.52
GDNFP39905 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
GDNFP39905 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.27■□□□□ 0.51
GDNFP39905 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GDNFP39905 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.27■□□□□ 0.51
GDNFP39905 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GDNFP39905 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDNFP39905 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDNFP39905 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.26■□□□□ 0.51
GDNFP39905 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.26■□□□□ 0.51
GDNFP39905 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDNFP39905 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDNFP39905 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDNFP39905 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDNFP39905 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDNFP39905 AC131281.2-201ENST00000520478 145 ntBASIC18.26■□□□□ 0.51
GDNFP39905 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDNFP39905 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
GDNFP39905 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
GDNFP39905 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDNFP39905 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
GDNFP39905 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GDNFP39905 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDNFP39905 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.26■□□□□ 0.51
GDNFP39905 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDNFP39905 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.25■□□□□ 0.51
GDNFP39905 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
GDNFP39905 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.25■□□□□ 0.51
GDNFP39905 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
GDNFP39905 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.25■□□□□ 0.51
GDNFP39905 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
GDNFP39905 GABARAPL3-202ENST00000624044 1851 ntBASIC18.25■□□□□ 0.51
GDNFP39905 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GDNFP39905 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.25■□□□□ 0.51
GDNFP39905 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.25■□□□□ 0.51
GDNFP39905 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.25■□□□□ 0.51
GDNFP39905 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GDNFP39905 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.25■□□□□ 0.51
GDNFP39905 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
GDNFP39905 AC131212.1-201ENST00000613771 668 ntBASIC18.25■□□□□ 0.51
GDNFP39905 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
GDNFP39905 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GDNFP39905 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.25■□□□□ 0.51
GDNFP39905 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GDNFP39905 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GDNFP39905 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GDNFP39905 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GDNFP39905 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.25■□□□□ 0.51
GDNFP39905 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
GDNFP39905 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GDNFP39905 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.24■□□□□ 0.51
GDNFP39905 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.24■□□□□ 0.51
GDNFP39905 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
GDNFP39905 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.24■□□□□ 0.51
GDNFP39905 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms