Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
SNRPA1P09661 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC27.04■■□□□ 1.92
SNRPA1P09661 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC27.04■■□□□ 1.92
SNRPA1P09661 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC27.04■■□□□ 1.92
SNRPA1P09661 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SNRPA1P09661 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
SNRPA1P09661 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC27.03■■□□□ 1.92
SNRPA1P09661 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC27.03■■□□□ 1.92
SNRPA1P09661 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC27.03■■□□□ 1.92
SNRPA1P09661 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SNRPA1P09661 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
SNRPA1P09661 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
SNRPA1P09661 RARRES2P4-201ENST00000514074 484 ntBASIC27.03■■□□□ 1.92
SNRPA1P09661 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
SNRPA1P09661 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC27.03■■□□□ 1.92
SNRPA1P09661 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
SNRPA1P09661 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SNRPA1P09661 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
SNRPA1P09661 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC27.02■■□□□ 1.92
SNRPA1P09661 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SNRPA1P09661 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
SNRPA1P09661 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC27.02■■□□□ 1.92
SNRPA1P09661 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SNRPA1P09661 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
SNRPA1P09661 CD44-222ENST00000526025 1052 ntTSL 2 BASIC27.02■■□□□ 1.92
SNRPA1P09661 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
SNRPA1P09661 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
SNRPA1P09661 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
SNRPA1P09661 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC27.02■■□□□ 1.92
SNRPA1P09661 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC27.02■■□□□ 1.92
SNRPA1P09661 AC010542.4-201ENST00000563151 1910 ntBASIC27.02■■□□□ 1.92
SNRPA1P09661 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
SNRPA1P09661 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SNRPA1P09661 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
SNRPA1P09661 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
SNRPA1P09661 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SNRPA1P09661 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SNRPA1P09661 BX276092.2-201ENST00000417668 665 ntBASIC27.01■■□□□ 1.91
SNRPA1P09661 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC27.01■■□□□ 1.91
SNRPA1P09661 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
SNRPA1P09661 TBCB-214ENST00000629269 413 ntTSL 5 BASIC27.01■■□□□ 1.91
SNRPA1P09661 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
SNRPA1P09661 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SNRPA1P09661 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC27■■□□□ 1.91
SNRPA1P09661 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
SNRPA1P09661 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC27■■□□□ 1.91
SNRPA1P09661 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC27■■□□□ 1.91
SNRPA1P09661 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC27■■□□□ 1.91
SNRPA1P09661 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC27■■□□□ 1.91
SNRPA1P09661 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC27■■□□□ 1.91
SNRPA1P09661 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SNRPA1P09661 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC27■■□□□ 1.91
SNRPA1P09661 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SNRPA1P09661 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SNRPA1P09661 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
SNRPA1P09661 AC010980.2-201ENST00000587099 1412 ntBASIC26.99■■□□□ 1.91
SNRPA1P09661 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SNRPA1P09661 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SNRPA1P09661 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC26.99■■□□□ 1.91
SNRPA1P09661 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC26.99■■□□□ 1.91
SNRPA1P09661 PBX1-209ENST00000485769 834 ntTSL 2 BASIC26.99■■□□□ 1.91
SNRPA1P09661 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC26.99■■□□□ 1.91
SNRPA1P09661 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC26.99■■□□□ 1.91
SNRPA1P09661 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SNRPA1P09661 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SNRPA1P09661 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.99■■□□□ 1.91
SNRPA1P09661 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.99■■□□□ 1.91
SNRPA1P09661 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
SNRPA1P09661 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.98■■□□□ 1.91
SNRPA1P09661 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SNRPA1P09661 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.98■■□□□ 1.91
SNRPA1P09661 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.98■■□□□ 1.91
SNRPA1P09661 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SNRPA1P09661 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.98■■□□□ 1.91
SNRPA1P09661 FAM99A-202ENST00000538190 1989 ntBASIC26.98■■□□□ 1.91
SNRPA1P09661 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SNRPA1P09661 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.98■■□□□ 1.91
SNRPA1P09661 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SNRPA1P09661 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SNRPA1P09661 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.97■■□□□ 1.91
SNRPA1P09661 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SNRPA1P09661 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
SNRPA1P09661 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SNRPA1P09661 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
SNRPA1P09661 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
SNRPA1P09661 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SNRPA1P09661 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.96■■□□□ 1.91
SNRPA1P09661 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
SNRPA1P09661 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC26.96■■□□□ 1.91
SNRPA1P09661 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SNRPA1P09661 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC26.96■■□□□ 1.91
SNRPA1P09661 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SNRPA1P09661 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC26.96■■□□□ 1.91
SNRPA1P09661 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SNRPA1P09661 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.96■■□□□ 1.91
SNRPA1P09661 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SNRPA1P09661 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SNRPA1P09661 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
SNRPA1P09661 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.95■■□□□ 1.91
SNRPA1P09661 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms