Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLTAP09496 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.04■■□□□ 1.28
CLTAP09496 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLTAP09496 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLTAP09496 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLTAP09496 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CLTAP09496 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CLTAP09496 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLTAP09496 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLTAP09496 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLTAP09496 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLTAP09496 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CLTAP09496 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLTAP09496 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CLTAP09496 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.03■■□□□ 1.28
CLTAP09496 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CLTAP09496 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLTAP09496 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLTAP09496 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLTAP09496 AC004911.1-201ENST00000416316 871 ntBASIC23.03■■□□□ 1.28
CLTAP09496 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.03■■□□□ 1.28
CLTAP09496 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.03■■□□□ 1.28
CLTAP09496 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.03■■□□□ 1.28
CLTAP09496 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.03■■□□□ 1.28
CLTAP09496 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.03■■□□□ 1.28
CLTAP09496 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLTAP09496 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.03■■□□□ 1.28
CLTAP09496 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.03■■□□□ 1.28
CLTAP09496 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
CLTAP09496 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CLTAP09496 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CLTAP09496 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CLTAP09496 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CLTAP09496 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLTAP09496 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.02■■□□□ 1.28
CLTAP09496 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CLTAP09496 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CLTAP09496 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CLTAP09496 KRT18P11-201ENST00000435214 1283 ntBASIC23.02■■□□□ 1.28
CLTAP09496 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.02■■□□□ 1.28
CLTAP09496 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.02■■□□□ 1.28
CLTAP09496 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CLTAP09496 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CLTAP09496 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLTAP09496 AC010542.4-201ENST00000563151 1910 ntBASIC23.02■■□□□ 1.28
CLTAP09496 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLTAP09496 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLTAP09496 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.02■■□□□ 1.27
CLTAP09496 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CLTAP09496 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.01■■□□□ 1.27
CLTAP09496 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CLTAP09496 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLTAP09496 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.01■■□□□ 1.27
CLTAP09496 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLTAP09496 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CLTAP09496 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.01■■□□□ 1.27
CLTAP09496 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.01■■□□□ 1.27
CLTAP09496 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CLTAP09496 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLTAP09496 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLTAP09496 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CLTAP09496 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLTAP09496 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLTAP09496 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLTAP09496 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLTAP09496 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLTAP09496 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23■■□□□ 1.27
CLTAP09496 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23■■□□□ 1.27
CLTAP09496 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CLTAP09496 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23■■□□□ 1.27
CLTAP09496 KRT18P20-201ENST00000548986 1279 ntBASIC23■■□□□ 1.27
CLTAP09496 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23■■□□□ 1.27
CLTAP09496 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
CLTAP09496 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23■■□□□ 1.27
CLTAP09496 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLTAP09496 GAS2L1P2-201ENST00000436355 1356 ntBASIC23■■□□□ 1.27
CLTAP09496 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
CLTAP09496 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23■■□□□ 1.27
CLTAP09496 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.99■■□□□ 1.27
CLTAP09496 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLTAP09496 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLTAP09496 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLTAP09496 PKD1P6-201ENST00000343738 4769 ntBASIC22.99■■□□□ 1.27
CLTAP09496 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLTAP09496 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CLTAP09496 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.99■■□□□ 1.27
CLTAP09496 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
CLTAP09496 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLTAP09496 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLTAP09496 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.99■■□□□ 1.27
CLTAP09496 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.99■■□□□ 1.27
CLTAP09496 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.99■■□□□ 1.27
CLTAP09496 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.99■■□□□ 1.27
CLTAP09496 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.99■■□□□ 1.27
CLTAP09496 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.99■■□□□ 1.27
CLTAP09496 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.99■■□□□ 1.27
CLTAP09496 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLTAP09496 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CLTAP09496 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLTAP09496 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms