Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.49■■□□□ 1.67
CHGBP05060 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
CHGBP05060 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC25.49■■□□□ 1.67
CHGBP05060 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CHGBP05060 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC25.49■■□□□ 1.67
CHGBP05060 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
CHGBP05060 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CHGBP05060 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CHGBP05060 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CHGBP05060 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CHGBP05060 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.48■■□□□ 1.67
CHGBP05060 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
CHGBP05060 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC25.48■■□□□ 1.67
CHGBP05060 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25.48■■□□□ 1.67
CHGBP05060 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.48■■□□□ 1.67
CHGBP05060 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.48■■□□□ 1.67
CHGBP05060 WWOX-218ENST00000627394 894 ntTSL 5 BASIC25.48■■□□□ 1.67
CHGBP05060 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CHGBP05060 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CHGBP05060 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHGBP05060 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHGBP05060 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
CHGBP05060 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
CHGBP05060 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CHGBP05060 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHGBP05060 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.47■■□□□ 1.67
CHGBP05060 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHGBP05060 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHGBP05060 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC25.47■■□□□ 1.67
CHGBP05060 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHGBP05060 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHGBP05060 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHGBP05060 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHGBP05060 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CHGBP05060 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CHGBP05060 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.46■■□□□ 1.67
CHGBP05060 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CHGBP05060 SPI1-203ENST00000533030 661 ntTSL 2 BASIC25.46■■□□□ 1.67
CHGBP05060 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC25.46■■□□□ 1.67
CHGBP05060 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC25.46■■□□□ 1.67
CHGBP05060 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CHGBP05060 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CHGBP05060 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
CHGBP05060 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
CHGBP05060 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.46■■□□□ 1.67
CHGBP05060 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.46■■□□□ 1.67
CHGBP05060 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CHGBP05060 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.46■■□□□ 1.67
CHGBP05060 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CHGBP05060 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CHGBP05060 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CHGBP05060 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
CHGBP05060 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHGBP05060 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHGBP05060 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHGBP05060 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHGBP05060 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHGBP05060 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHGBP05060 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.44■■□□□ 1.66
CHGBP05060 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHGBP05060 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHGBP05060 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.44■■□□□ 1.66
CHGBP05060 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC25.44■■□□□ 1.66
CHGBP05060 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHGBP05060 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
CHGBP05060 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHGBP05060 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHGBP05060 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHGBP05060 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC25.43■■□□□ 1.66
CHGBP05060 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CHGBP05060 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHGBP05060 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHGBP05060 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.43■■□□□ 1.66
CHGBP05060 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.43■■□□□ 1.66
CHGBP05060 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC25.43■■□□□ 1.66
CHGBP05060 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC25.43■■□□□ 1.66
CHGBP05060 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHGBP05060 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CHGBP05060 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHGBP05060 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CHGBP05060 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHGBP05060 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHGBP05060 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
CHGBP05060 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC25.42■■□□□ 1.66
CHGBP05060 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHGBP05060 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CHGBP05060 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
CHGBP05060 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.42■■□□□ 1.66
CHGBP05060 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
CHGBP05060 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.42■■□□□ 1.66
CHGBP05060 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25.42■■□□□ 1.66
CHGBP05060 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHGBP05060 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC25.42■■□□□ 1.66
CHGBP05060 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.42■■□□□ 1.66
CHGBP05060 MFSD11-216ENST00000590393 1141 ntBASIC25.42■■□□□ 1.66
CHGBP05060 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHGBP05060 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CHGBP05060 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CHGBP05060 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
CHGBP05060 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms