Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TGFAP01135 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.37■□□□□ 0.37
TGFAP01135 RARRES2P4-201ENST00000514074 484 ntBASIC17.37■□□□□ 0.37
TGFAP01135 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TGFAP01135 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.37■□□□□ 0.37
TGFAP01135 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.37■□□□□ 0.37
TGFAP01135 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TGFAP01135 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TGFAP01135 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TGFAP01135 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TGFAP01135 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TGFAP01135 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.37■□□□□ 0.37
TGFAP01135 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TGFAP01135 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TGFAP01135 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TGFAP01135 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TGFAP01135 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TGFAP01135 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TGFAP01135 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.36■□□□□ 0.37
TGFAP01135 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
TGFAP01135 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.36■□□□□ 0.37
TGFAP01135 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TGFAP01135 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TGFAP01135 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.36■□□□□ 0.37
TGFAP01135 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
TGFAP01135 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TGFAP01135 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TGFAP01135 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TGFAP01135 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TGFAP01135 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TGFAP01135 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TGFAP01135 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TGFAP01135 PRORSD1P-201ENST00000295112 541 ntBASIC17.35■□□□□ 0.37
TGFAP01135 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TGFAP01135 ESRRAP1-201ENST00000400596 1257 ntBASIC17.35■□□□□ 0.37
TGFAP01135 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.35■□□□□ 0.37
TGFAP01135 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.35■□□□□ 0.37
TGFAP01135 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.35■□□□□ 0.37
TGFAP01135 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.35■□□□□ 0.37
TGFAP01135 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.35■□□□□ 0.37
TGFAP01135 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.35■□□□□ 0.37
TGFAP01135 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.35■□□□□ 0.37
TGFAP01135 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.35■□□□□ 0.37
TGFAP01135 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TGFAP01135 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TGFAP01135 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TGFAP01135 AC010980.2-201ENST00000587099 1412 ntBASIC17.35■□□□□ 0.37
TGFAP01135 RBM17P2-201ENST00000616397 1405 ntBASIC17.35■□□□□ 0.37
TGFAP01135 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.35■□□□□ 0.37
TGFAP01135 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TGFAP01135 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TGFAP01135 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TGFAP01135 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TGFAP01135 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TGFAP01135 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TGFAP01135 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TGFAP01135 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TGFAP01135 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TGFAP01135 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TGFAP01135 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TGFAP01135 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TGFAP01135 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TGFAP01135 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.34■□□□□ 0.37
TGFAP01135 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.34■□□□□ 0.37
TGFAP01135 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TGFAP01135 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TGFAP01135 AL162412.1-201ENST00000567129 965 ntBASIC17.34■□□□□ 0.37
TGFAP01135 AC087742.1-201ENST00000575880 1738 ntBASIC17.34■□□□□ 0.37
TGFAP01135 AC083880.1-201ENST00000608266 535 ntBASIC17.34■□□□□ 0.37
TGFAP01135 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TGFAP01135 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.34■□□□□ 0.37
TGFAP01135 AP006294.2-201ENST00000641667 209 ntBASIC17.34■□□□□ 0.37
TGFAP01135 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TGFAP01135 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.33■□□□□ 0.37
TGFAP01135 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TGFAP01135 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TGFAP01135 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.33■□□□□ 0.37
TGFAP01135 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TGFAP01135 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.33■□□□□ 0.36
TGFAP01135 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TGFAP01135 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TGFAP01135 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TGFAP01135 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
TGFAP01135 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.33■□□□□ 0.36
TGFAP01135 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TGFAP01135 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TGFAP01135 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.33■□□□□ 0.36
TGFAP01135 AC139530.1-201ENST00000575312 1977 ntBASIC17.33■□□□□ 0.36
TGFAP01135 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.33■□□□□ 0.36
TGFAP01135 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TGFAP01135 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.33■□□□□ 0.36
TGFAP01135 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TGFAP01135 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TGFAP01135 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.32■□□□□ 0.36
TGFAP01135 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TGFAP01135 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TGFAP01135 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TGFAP01135 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.32■□□□□ 0.36
TGFAP01135 DUSP5P2-201ENST00000426873 1033 ntBASIC17.32■□□□□ 0.36
TGFAP01135 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms