Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC005837.3-201ENST00000612163 286 ntBASIC21.17■□□□□ 0.98
VAPBO95292 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VAPBO95292 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VAPBO95292 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VAPBO95292 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VAPBO95292 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VAPBO95292 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.17■□□□□ 0.98
VAPBO95292 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VAPBO95292 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.17■□□□□ 0.98
VAPBO95292 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.17■□□□□ 0.98
VAPBO95292 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VAPBO95292 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VAPBO95292 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
VAPBO95292 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VAPBO95292 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
VAPBO95292 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VAPBO95292 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
VAPBO95292 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VAPBO95292 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VAPBO95292 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.16■□□□□ 0.98
VAPBO95292 AC012414.1-201ENST00000556676 535 ntBASIC21.16■□□□□ 0.98
VAPBO95292 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.16■□□□□ 0.98
VAPBO95292 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VAPBO95292 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
VAPBO95292 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VAPBO95292 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
VAPBO95292 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VAPBO95292 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VAPBO95292 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VAPBO95292 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
VAPBO95292 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VAPBO95292 SLC25A24-204ENST00000569674 2357 ntBASIC21.15■□□□□ 0.98
VAPBO95292 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VAPBO95292 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.15■□□□□ 0.98
VAPBO95292 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.15■□□□□ 0.98
VAPBO95292 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.15■□□□□ 0.98
VAPBO95292 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.15■□□□□ 0.98
VAPBO95292 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.15■□□□□ 0.98
VAPBO95292 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VAPBO95292 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VAPBO95292 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.15■□□□□ 0.98
VAPBO95292 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VAPBO95292 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VAPBO95292 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.14■□□□□ 0.98
VAPBO95292 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
VAPBO95292 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VAPBO95292 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.14■□□□□ 0.97
VAPBO95292 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VAPBO95292 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VAPBO95292 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.14■□□□□ 0.97
VAPBO95292 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VAPBO95292 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.14■□□□□ 0.97
VAPBO95292 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
VAPBO95292 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
VAPBO95292 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
VAPBO95292 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VAPBO95292 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VAPBO95292 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.13■□□□□ 0.97
VAPBO95292 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.13■□□□□ 0.97
VAPBO95292 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.13■□□□□ 0.97
VAPBO95292 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VAPBO95292 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.13■□□□□ 0.97
VAPBO95292 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
VAPBO95292 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VAPBO95292 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
VAPBO95292 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VAPBO95292 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VAPBO95292 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.13■□□□□ 0.97
VAPBO95292 AL354811.1-201ENST00000610286 706 ntBASIC21.13■□□□□ 0.97
VAPBO95292 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VAPBO95292 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VAPBO95292 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.13■□□□□ 0.97
VAPBO95292 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VAPBO95292 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
VAPBO95292 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VAPBO95292 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
VAPBO95292 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.12■□□□□ 0.97
VAPBO95292 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VAPBO95292 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.12■□□□□ 0.97
VAPBO95292 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
VAPBO95292 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.12■□□□□ 0.97
VAPBO95292 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.12■□□□□ 0.97
VAPBO95292 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.12■□□□□ 0.97
VAPBO95292 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.12■□□□□ 0.97
VAPBO95292 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.12■□□□□ 0.97
VAPBO95292 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VAPBO95292 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VAPBO95292 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VAPBO95292 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VAPBO95292 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.12■□□□□ 0.97
VAPBO95292 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
VAPBO95292 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VAPBO95292 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VAPBO95292 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VAPBO95292 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VAPBO95292 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.11■□□□□ 0.97
VAPBO95292 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.11■□□□□ 0.97
VAPBO95292 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VAPBO95292 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.11■□□□□ 0.97
VAPBO95292 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms