Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDM4BO94953 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDM4BO94953 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDM4BO94953 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDM4BO94953 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDM4BO94953 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KDM4BO94953 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDM4BO94953 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDM4BO94953 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.41■□□□□ 0.54
KDM4BO94953 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDM4BO94953 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.41■□□□□ 0.54
KDM4BO94953 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDM4BO94953 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDM4BO94953 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.41■□□□□ 0.54
KDM4BO94953 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDM4BO94953 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KDM4BO94953 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.41■□□□□ 0.54
KDM4BO94953 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDM4BO94953 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KDM4BO94953 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDM4BO94953 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.41■□□□□ 0.54
KDM4BO94953 LINC01521-201ENST00000504184 1943 ntBASIC18.41■□□□□ 0.54
KDM4BO94953 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.41■□□□□ 0.54
KDM4BO94953 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
KDM4BO94953 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM4BO94953 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM4BO94953 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.4■□□□□ 0.54
KDM4BO94953 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.4■□□□□ 0.54
KDM4BO94953 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM4BO94953 OR2I1P-207ENST00000453522 948 ntBASIC18.4■□□□□ 0.54
KDM4BO94953 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
KDM4BO94953 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.4■□□□□ 0.54
KDM4BO94953 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.4■□□□□ 0.54
KDM4BO94953 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.4■□□□□ 0.54
KDM4BO94953 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM4BO94953 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.4■□□□□ 0.54
KDM4BO94953 AC068587.7-201ENST00000641602 218 ntBASIC18.4■□□□□ 0.54
KDM4BO94953 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM4BO94953 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.4■□□□□ 0.54
KDM4BO94953 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM4BO94953 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM4BO94953 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM4BO94953 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM4BO94953 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KDM4BO94953 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KDM4BO94953 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
KDM4BO94953 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
KDM4BO94953 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.54
KDM4BO94953 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.39■□□□□ 0.53
KDM4BO94953 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
KDM4BO94953 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM4BO94953 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM4BO94953 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KDM4BO94953 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
KDM4BO94953 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM4BO94953 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM4BO94953 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM4BO94953 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM4BO94953 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.39■□□□□ 0.53
KDM4BO94953 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.39■□□□□ 0.53
KDM4BO94953 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.39■□□□□ 0.53
KDM4BO94953 AC079089.2-201ENST00000531211 1277 ntBASIC18.39■□□□□ 0.53
KDM4BO94953 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
KDM4BO94953 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM4BO94953 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM4BO94953 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
KDM4BO94953 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM4BO94953 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM4BO94953 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM4BO94953 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.39■□□□□ 0.53
KDM4BO94953 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KDM4BO94953 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDM4BO94953 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDM4BO94953 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.38■□□□□ 0.53
KDM4BO94953 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDM4BO94953 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDM4BO94953 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDM4BO94953 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDM4BO94953 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.38■□□□□ 0.53
KDM4BO94953 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.38■□□□□ 0.53
KDM4BO94953 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDM4BO94953 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KDM4BO94953 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDM4BO94953 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KDM4BO94953 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KDM4BO94953 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDM4BO94953 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KDM4BO94953 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.38■□□□□ 0.53
KDM4BO94953 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDM4BO94953 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KDM4BO94953 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KDM4BO94953 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.37■□□□□ 0.53
KDM4BO94953 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KDM4BO94953 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KDM4BO94953 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KDM4BO94953 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KDM4BO94953 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KDM4BO94953 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KDM4BO94953 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.37■□□□□ 0.53
KDM4BO94953 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms