Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.25■□□□□ 0.67
IDH3BO43837 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IDH3BO43837 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IDH3BO43837 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IDH3BO43837 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IDH3BO43837 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IDH3BO43837 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IDH3BO43837 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3BO43837 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3BO43837 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.24■□□□□ 0.67
IDH3BO43837 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3BO43837 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.24■□□□□ 0.67
IDH3BO43837 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
IDH3BO43837 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
IDH3BO43837 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3BO43837 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
IDH3BO43837 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3BO43837 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3BO43837 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
IDH3BO43837 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
IDH3BO43837 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3BO43837 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3BO43837 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3BO43837 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.23■□□□□ 0.67
IDH3BO43837 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
IDH3BO43837 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
IDH3BO43837 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3BO43837 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.23■□□□□ 0.67
IDH3BO43837 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
IDH3BO43837 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3BO43837 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3BO43837 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.23■□□□□ 0.67
IDH3BO43837 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.23■□□□□ 0.67
IDH3BO43837 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.23■□□□□ 0.67
IDH3BO43837 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.23■□□□□ 0.67
IDH3BO43837 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.23■□□□□ 0.67
IDH3BO43837 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.23■□□□□ 0.67
IDH3BO43837 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3BO43837 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3BO43837 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
IDH3BO43837 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3BO43837 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3BO43837 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
IDH3BO43837 SYT6-210ENST00000641643 1587 ntBASIC19.23■□□□□ 0.67
IDH3BO43837 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
IDH3BO43837 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.22■□□□□ 0.67
IDH3BO43837 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3BO43837 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3BO43837 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3BO43837 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.22■□□□□ 0.67
IDH3BO43837 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
IDH3BO43837 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3BO43837 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3BO43837 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3BO43837 AP005435.1-201ENST00000529293 1178 ntBASIC19.22■□□□□ 0.67
IDH3BO43837 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.22■□□□□ 0.67
IDH3BO43837 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.22■□□□□ 0.67
IDH3BO43837 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3BO43837 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
IDH3BO43837 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
IDH3BO43837 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3BO43837 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3BO43837 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3BO43837 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.22■□□□□ 0.67
IDH3BO43837 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IDH3BO43837 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
IDH3BO43837 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
IDH3BO43837 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
IDH3BO43837 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.21■□□□□ 0.67
IDH3BO43837 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.21■□□□□ 0.67
IDH3BO43837 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.21■□□□□ 0.67
IDH3BO43837 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.21■□□□□ 0.67
IDH3BO43837 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IDH3BO43837 AC010525.1-201ENST00000585559 441 ntBASIC19.21■□□□□ 0.67
IDH3BO43837 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IDH3BO43837 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IDH3BO43837 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.21■□□□□ 0.67
IDH3BO43837 AC011298.3-201ENST00000615796 283 ntBASIC19.21■□□□□ 0.67
IDH3BO43837 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.21■□□□□ 0.67
IDH3BO43837 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
IDH3BO43837 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IDH3BO43837 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IDH3BO43837 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.21■□□□□ 0.67
IDH3BO43837 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IDH3BO43837 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IDH3BO43837 LINC01521-201ENST00000504184 1943 ntBASIC19.2■□□□□ 0.66
IDH3BO43837 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.2■□□□□ 0.66
IDH3BO43837 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IDH3BO43837 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IDH3BO43837 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.2■□□□□ 0.66
IDH3BO43837 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.2■□□□□ 0.66
IDH3BO43837 AC136469.2-201ENST00000623944 1028 ntBASIC19.2■□□□□ 0.66
IDH3BO43837 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
IDH3BO43837 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IDH3BO43837 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IDH3BO43837 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
IDH3BO43837 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IDH3BO43837 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IDH3BO43837 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IDH3BO43837 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms