Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SRGAP3O43295 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
SRGAP3O43295 MFF-203ENST00000349901 1716 ntTSL 2 BASIC26.27■■□□□ 1.8
SRGAP3O43295 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.27■■□□□ 1.8
SRGAP3O43295 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.27■■□□□ 1.8
SRGAP3O43295 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC26.27■■□□□ 1.8
SRGAP3O43295 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC26.27■■□□□ 1.8
SRGAP3O43295 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
SRGAP3O43295 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC26.26■■□□□ 1.79
SRGAP3O43295 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC26.26■■□□□ 1.79
SRGAP3O43295 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SRGAP3O43295 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
SRGAP3O43295 AC061975.6-201ENST00000579045 1553 ntBASIC26.26■■□□□ 1.79
SRGAP3O43295 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SRGAP3O43295 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC26.26■■□□□ 1.79
SRGAP3O43295 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26.26■■□□□ 1.79
SRGAP3O43295 UBE2DNL-204ENST00000602536 740 ntBASIC26.26■■□□□ 1.79
SRGAP3O43295 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SRGAP3O43295 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SRGAP3O43295 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.25■■□□□ 1.79
SRGAP3O43295 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SRGAP3O43295 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SRGAP3O43295 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SRGAP3O43295 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC26.25■■□□□ 1.79
SRGAP3O43295 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SRGAP3O43295 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
SRGAP3O43295 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SRGAP3O43295 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.25■■□□□ 1.79
SRGAP3O43295 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC26.25■■□□□ 1.79
SRGAP3O43295 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC26.25■■□□□ 1.79
SRGAP3O43295 SLC7A5P2-201ENST00000553010 536 ntBASIC26.25■■□□□ 1.79
SRGAP3O43295 WWOX-218ENST00000627394 894 ntTSL 5 BASIC26.25■■□□□ 1.79
SRGAP3O43295 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SRGAP3O43295 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SRGAP3O43295 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
SRGAP3O43295 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SRGAP3O43295 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SRGAP3O43295 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SRGAP3O43295 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SRGAP3O43295 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
SRGAP3O43295 AL137784.2-201ENST00000607332 1000 ntBASIC26.24■■□□□ 1.79
SRGAP3O43295 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC26.24■■□□□ 1.79
SRGAP3O43295 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC26.24■■□□□ 1.79
SRGAP3O43295 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SRGAP3O43295 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SRGAP3O43295 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC26.24■■□□□ 1.79
SRGAP3O43295 AC244015.2-201ENST00000616358 1861 ntBASIC26.23■■□□□ 1.79
SRGAP3O43295 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SRGAP3O43295 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SRGAP3O43295 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SRGAP3O43295 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SRGAP3O43295 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC26.23■■□□□ 1.79
SRGAP3O43295 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SRGAP3O43295 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SRGAP3O43295 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SRGAP3O43295 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SRGAP3O43295 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SRGAP3O43295 SPI1-203ENST00000533030 661 ntTSL 2 BASIC26.23■■□□□ 1.79
SRGAP3O43295 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC26.23■■□□□ 1.79
SRGAP3O43295 AC008175.2-201ENST00000612840 297 ntBASIC26.23■■□□□ 1.79
SRGAP3O43295 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
SRGAP3O43295 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SRGAP3O43295 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
SRGAP3O43295 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SRGAP3O43295 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SRGAP3O43295 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SRGAP3O43295 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
SRGAP3O43295 AC004911.1-201ENST00000416316 871 ntBASIC26.22■■□□□ 1.79
SRGAP3O43295 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.22■■□□□ 1.79
SRGAP3O43295 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC26.22■■□□□ 1.79
SRGAP3O43295 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC26.22■■□□□ 1.79
SRGAP3O43295 KRT18P20-201ENST00000548986 1279 ntBASIC26.22■■□□□ 1.79
SRGAP3O43295 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC26.22■■□□□ 1.79
SRGAP3O43295 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SRGAP3O43295 TUB-203ENST00000534099 1759 ntTSL 2 BASIC26.22■■□□□ 1.79
SRGAP3O43295 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC26.22■■□□□ 1.79
SRGAP3O43295 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SRGAP3O43295 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SRGAP3O43295 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SRGAP3O43295 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SRGAP3O43295 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SRGAP3O43295 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SRGAP3O43295 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SRGAP3O43295 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SRGAP3O43295 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SRGAP3O43295 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SRGAP3O43295 POU5F1P4-201ENST00000413175 1085 ntBASIC26.21■■□□□ 1.79
SRGAP3O43295 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC26.21■■□□□ 1.79
SRGAP3O43295 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC26.21■■□□□ 1.79
SRGAP3O43295 TFG-210ENST00000620299 1289 ntTSL 5 BASIC26.21■■□□□ 1.79
SRGAP3O43295 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SRGAP3O43295 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC26.21■■□□□ 1.79
SRGAP3O43295 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC26.21■■□□□ 1.79
SRGAP3O43295 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC26.21■■□□□ 1.79
SRGAP3O43295 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SRGAP3O43295 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SRGAP3O43295 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
SRGAP3O43295 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.2■■□□□ 1.79
SRGAP3O43295 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
SRGAP3O43295 WWC2-AS2-201ENST00000578387 2183 ntBASIC26.2■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms