Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RRP8O43159 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RRP8O43159 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RRP8O43159 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RRP8O43159 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RRP8O43159 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RRP8O43159 KRT17P3-201ENST00000420566 1262 ntBASIC19.89■□□□□ 0.77
RRP8O43159 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.89■□□□□ 0.77
RRP8O43159 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.89■□□□□ 0.77
RRP8O43159 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.89■□□□□ 0.77
RRP8O43159 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
RRP8O43159 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.89■□□□□ 0.77
RRP8O43159 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RRP8O43159 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RRP8O43159 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
RRP8O43159 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RRP8O43159 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.88■□□□□ 0.77
RRP8O43159 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RRP8O43159 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RRP8O43159 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.88■□□□□ 0.77
RRP8O43159 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.88■□□□□ 0.77
RRP8O43159 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
RRP8O43159 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RRP8O43159 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.88■□□□□ 0.77
RRP8O43159 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RRP8O43159 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RRP8O43159 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RRP8O43159 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RRP8O43159 SNORA78-201ENST00000459373 127 ntBASIC19.87■□□□□ 0.77
RRP8O43159 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RRP8O43159 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.87■□□□□ 0.77
RRP8O43159 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.87■□□□□ 0.77
RRP8O43159 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.87■□□□□ 0.77
RRP8O43159 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.87■□□□□ 0.77
RRP8O43159 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RRP8O43159 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.87■□□□□ 0.77
RRP8O43159 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RRP8O43159 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RRP8O43159 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RRP8O43159 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RRP8O43159 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RRP8O43159 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.86■□□□□ 0.77
RRP8O43159 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RRP8O43159 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RRP8O43159 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.86■□□□□ 0.77
RRP8O43159 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RRP8O43159 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
RRP8O43159 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.86■□□□□ 0.77
RRP8O43159 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RRP8O43159 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.86■□□□□ 0.77
RRP8O43159 KRT18P21-201ENST00000515767 1272 ntBASIC19.86■□□□□ 0.77
RRP8O43159 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RRP8O43159 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.86■□□□□ 0.77
RRP8O43159 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RRP8O43159 AC060766.5-201ENST00000590539 871 ntBASIC19.86■□□□□ 0.77
RRP8O43159 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.86■□□□□ 0.77
RRP8O43159 CYP2T3P-201ENST00000601990 817 ntBASIC19.86■□□□□ 0.77
RRP8O43159 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.86■□□□□ 0.77
RRP8O43159 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RRP8O43159 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RRP8O43159 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.85■□□□□ 0.77
RRP8O43159 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RRP8O43159 OR7E47P-201ENST00000546390 1422 ntBASIC19.85■□□□□ 0.77
RRP8O43159 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.85■□□□□ 0.77
RRP8O43159 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RRP8O43159 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.85■□□□□ 0.77
RRP8O43159 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
RRP8O43159 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.85■□□□□ 0.77
RRP8O43159 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.85■□□□□ 0.77
RRP8O43159 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RRP8O43159 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.85■□□□□ 0.77
RRP8O43159 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RRP8O43159 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RRP8O43159 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.85■□□□□ 0.77
RRP8O43159 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RRP8O43159 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RRP8O43159 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RRP8O43159 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RRP8O43159 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RRP8O43159 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RRP8O43159 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RRP8O43159 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.84■□□□□ 0.77
RRP8O43159 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.84■□□□□ 0.77
RRP8O43159 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.84■□□□□ 0.77
RRP8O43159 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.84■□□□□ 0.77
RRP8O43159 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RRP8O43159 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RRP8O43159 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.84■□□□□ 0.77
RRP8O43159 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.84■□□□□ 0.77
RRP8O43159 HLA-B-256ENST00000639848 1089 ntBASIC19.84■□□□□ 0.77
RRP8O43159 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RRP8O43159 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RRP8O43159 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RRP8O43159 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RRP8O43159 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RRP8O43159 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RRP8O43159 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.83■□□□□ 0.77
RRP8O43159 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RRP8O43159 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RRP8O43159 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms