Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRDV1A0A1B0GX56 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 AL034346.1-201ENST00000568244 1277 ntBASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 AC027702.1-201ENST00000563810 1770 ntBASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRDV1A0A1B0GX56 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRDV1A0A1B0GX56 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRDV1A0A1B0GX56 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRDV1A0A1B0GX56 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRDV1A0A1B0GX56 ABHD17AP5-201ENST00000580133 923 ntBASIC18.53■□□□□ 0.56
TRDV1A0A1B0GX56 HSD17B1P1-201ENST00000590052 955 ntBASIC18.53■□□□□ 0.56
TRDV1A0A1B0GX56 AL451085.2-201ENST00000605085 799 ntBASIC18.53■□□□□ 0.56
TRDV1A0A1B0GX56 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.53■□□□□ 0.56
TRDV1A0A1B0GX56 AC133637.1-201ENST00000624115 1537 ntBASIC18.53■□□□□ 0.56
TRDV1A0A1B0GX56 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRDV1A0A1B0GX56 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRDV1A0A1B0GX56 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TRDV1A0A1B0GX56 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRDV1A0A1B0GX56 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRDV1A0A1B0GX56 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRDV1A0A1B0GX56 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TRDV1A0A1B0GX56 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.52■□□□□ 0.56
TRDV1A0A1B0GX56 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRDV1A0A1B0GX56 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
TRDV1A0A1B0GX56 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRDV1A0A1B0GX56 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRDV1A0A1B0GX56 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.52■□□□□ 0.56
TRDV1A0A1B0GX56 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRDV1A0A1B0GX56 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRDV1A0A1B0GX56 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRDV1A0A1B0GX56 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRDV1A0A1B0GX56 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRDV1A0A1B0GX56 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRDV1A0A1B0GX56 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRDV1A0A1B0GX56 PCDHAC2-203ENST00000615316 3011 ntBASIC18.52■□□□□ 0.55
TRDV1A0A1B0GX56 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.52■□□□□ 0.55
TRDV1A0A1B0GX56 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRDV1A0A1B0GX56 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 AC020907.5-201ENST00000624372 1936 ntBASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 TSPY13P-201ENST00000338964 914 ntBASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 Z92544.1-202ENST00000571933 1220 ntBASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRDV1A0A1B0GX56 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRDV1A0A1B0GX56 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRDV1A0A1B0GX56 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRDV1A0A1B0GX56 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRDV1A0A1B0GX56 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms