Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 AL049796.1-201ENST00000565336 1766 ntBASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 AL157384.1-201ENST00000445995 2473 ntBASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 AC099791.1-201ENST00000416440 715 ntBASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV27A0A087WT01 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV27A0A087WT01 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV27A0A087WT01 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV27A0A087WT01 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV27A0A087WT01 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV27A0A087WT01 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.08■□□□□ 0.65
TRAV27A0A087WT01 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV27A0A087WT01 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.08■□□□□ 0.64
TRAV27A0A087WT01 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TRAV27A0A087WT01 PBX2P1-201ENST00000493219 1291 ntBASIC19.08■□□□□ 0.64
TRAV27A0A087WT01 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.08■□□□□ 0.64
TRAV27A0A087WT01 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.08■□□□□ 0.64
TRAV27A0A087WT01 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV27A0A087WT01 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV27A0A087WT01 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV27A0A087WT01 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TRAV27A0A087WT01 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV27A0A087WT01 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV27A0A087WT01 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV27A0A087WT01 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV27A0A087WT01 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV27A0A087WT01 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV27A0A087WT01 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV27A0A087WT01 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV27A0A087WT01 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV27A0A087WT01 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV27A0A087WT01 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.07■□□□□ 0.64
TRAV27A0A087WT01 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.07■□□□□ 0.64
TRAV27A0A087WT01 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV27A0A087WT01 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV27A0A087WT01 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV27A0A087WT01 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TRAV27A0A087WT01 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV27A0A087WT01 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRAV27A0A087WT01 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV27A0A087WT01 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TRAV27A0A087WT01 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV27A0A087WT01 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.05■□□□□ 0.64
TRAV27A0A087WT01 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV27A0A087WT01 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAV27A0A087WT01 TSPY26P-201ENST00000476365 1326 ntBASIC19.05■□□□□ 0.64
TRAV27A0A087WT01 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV27A0A087WT01 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV27A0A087WT01 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.05■□□□□ 0.64
TRAV27A0A087WT01 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
TRAV27A0A087WT01 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV27A0A087WT01 AC027682.1-201ENST00000562846 899 ntBASIC19.05■□□□□ 0.64
TRAV27A0A087WT01 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV27A0A087WT01 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV27A0A087WT01 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms