Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHGB3Q9Y5G1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.99■□□□□ 0.79
PCDHGB3Q9Y5G1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHGB3Q9Y5G1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGB3Q9Y5G1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGB3Q9Y5G1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHGB3Q9Y5G1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
PCDHGB3Q9Y5G1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHGB3Q9Y5G1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHGB3Q9Y5G1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
PCDHGB3Q9Y5G1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGB3Q9Y5G1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHGB3Q9Y5G1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGB3Q9Y5G1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHGB3Q9Y5G1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGB3Q9Y5G1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHGB3Q9Y5G1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHGB3Q9Y5G1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGB3Q9Y5G1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGB3Q9Y5G1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGB3Q9Y5G1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
PCDHGB3Q9Y5G1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHGB3Q9Y5G1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PCDHGB3Q9Y5G1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGB3Q9Y5G1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB3Q9Y5G1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB3Q9Y5G1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PCDHGB3Q9Y5G1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB3Q9Y5G1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHGB3Q9Y5G1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB3Q9Y5G1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB3Q9Y5G1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB3Q9Y5G1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB3Q9Y5G1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHGB3Q9Y5G1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB3Q9Y5G1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB3Q9Y5G1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB3Q9Y5G1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGB3Q9Y5G1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGB3Q9Y5G1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGB3Q9Y5G1 IGHV3-19-201ENST00000521488 291 ntBASIC19.95■□□□□ 0.78
PCDHGB3Q9Y5G1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGB3Q9Y5G1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB3Q9Y5G1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHGB3Q9Y5G1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGB3Q9Y5G1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB3Q9Y5G1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PCDHGB3Q9Y5G1 FEM1AP4-201ENST00000443167 1987 ntBASIC19.95■□□□□ 0.78
PCDHGB3Q9Y5G1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGB3Q9Y5G1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGB3Q9Y5G1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 AP004607.7-201ENST00000527152 1677 ntBASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 AC104564.3-201ENST00000582367 638 ntBASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 AL358852.1-201ENST00000623174 1268 ntBASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGB3Q9Y5G1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms