Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TSC22D4Q9Y3Q8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TSC22D4Q9Y3Q8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TSC22D4Q9Y3Q8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TSC22D4Q9Y3Q8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TSC22D4Q9Y3Q8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TSC22D4Q9Y3Q8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TSC22D4Q9Y3Q8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TSC22D4Q9Y3Q8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.46■□□□□ 0.87
TSC22D4Q9Y3Q8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TSC22D4Q9Y3Q8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TSC22D4Q9Y3Q8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.46■□□□□ 0.87
TSC22D4Q9Y3Q8 AC012414.1-201ENST00000556676 535 ntBASIC20.46■□□□□ 0.87
TSC22D4Q9Y3Q8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.46■□□□□ 0.87
TSC22D4Q9Y3Q8 AC005837.3-201ENST00000612163 286 ntBASIC20.46■□□□□ 0.87
TSC22D4Q9Y3Q8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TSC22D4Q9Y3Q8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TSC22D4Q9Y3Q8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TSC22D4Q9Y3Q8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TSC22D4Q9Y3Q8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TSC22D4Q9Y3Q8 BX005040.4-201ENST00000637145 1518 ntBASIC20.44■□□□□ 0.86
TSC22D4Q9Y3Q8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.44■□□□□ 0.86
TSC22D4Q9Y3Q8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TSC22D4Q9Y3Q8 AC142381.2-201ENST00000566120 298 ntBASIC20.44■□□□□ 0.86
TSC22D4Q9Y3Q8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TSC22D4Q9Y3Q8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TSC22D4Q9Y3Q8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TSC22D4Q9Y3Q8 AC003102.1-202ENST00000563394 1796 ntBASIC20.44■□□□□ 0.86
TSC22D4Q9Y3Q8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TSC22D4Q9Y3Q8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.43■□□□□ 0.86
TSC22D4Q9Y3Q8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
TSC22D4Q9Y3Q8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TSC22D4Q9Y3Q8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TSC22D4Q9Y3Q8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TSC22D4Q9Y3Q8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TSC22D4Q9Y3Q8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TSC22D4Q9Y3Q8 MIR638-201ENST00000385237 100 ntBASIC20.42■□□□□ 0.86
TSC22D4Q9Y3Q8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.42■□□□□ 0.86
TSC22D4Q9Y3Q8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.42■□□□□ 0.86
TSC22D4Q9Y3Q8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
TSC22D4Q9Y3Q8 AL354811.1-201ENST00000610286 706 ntBASIC20.42■□□□□ 0.86
TSC22D4Q9Y3Q8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TSC22D4Q9Y3Q8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.42■□□□□ 0.86
TSC22D4Q9Y3Q8 AC055733.4-201ENST00000638462 1354 ntBASIC20.42■□□□□ 0.86
TSC22D4Q9Y3Q8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TSC22D4Q9Y3Q8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TSC22D4Q9Y3Q8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.42■□□□□ 0.86
TSC22D4Q9Y3Q8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TSC22D4Q9Y3Q8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.41■□□□□ 0.86
TSC22D4Q9Y3Q8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.41■□□□□ 0.86
TSC22D4Q9Y3Q8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.41■□□□□ 0.86
TSC22D4Q9Y3Q8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSC22D4Q9Y3Q8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TSC22D4Q9Y3Q8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TSC22D4Q9Y3Q8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.41■□□□□ 0.86
TSC22D4Q9Y3Q8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
TSC22D4Q9Y3Q8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TSC22D4Q9Y3Q8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.41■□□□□ 0.86
TSC22D4Q9Y3Q8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TSC22D4Q9Y3Q8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TSC22D4Q9Y3Q8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TSC22D4Q9Y3Q8 AC005224.4-201ENST00000583262 1652 ntBASIC20.41■□□□□ 0.86
TSC22D4Q9Y3Q8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms