Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
RTCBQ9Y3I0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RTCBQ9Y3I0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.92■■□□□ 1.9
RTCBQ9Y3I0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RTCBQ9Y3I0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.92■■□□□ 1.9
RTCBQ9Y3I0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RTCBQ9Y3I0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RTCBQ9Y3I0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.92■■□□□ 1.9
RTCBQ9Y3I0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.92■■□□□ 1.9
RTCBQ9Y3I0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RTCBQ9Y3I0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.92■■□□□ 1.9
RTCBQ9Y3I0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RTCBQ9Y3I0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RTCBQ9Y3I0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RTCBQ9Y3I0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RTCBQ9Y3I0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RTCBQ9Y3I0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RTCBQ9Y3I0 UBE2SP1-201ENST00000450587 669 ntBASIC26.91■■□□□ 1.9
RTCBQ9Y3I0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RTCBQ9Y3I0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC26.91■■□□□ 1.9
RTCBQ9Y3I0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
RTCBQ9Y3I0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC26.91■■□□□ 1.9
RTCBQ9Y3I0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.91■■□□□ 1.9
RTCBQ9Y3I0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
RTCBQ9Y3I0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RTCBQ9Y3I0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RTCBQ9Y3I0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC26.9■■□□□ 1.9
RTCBQ9Y3I0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RTCBQ9Y3I0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
RTCBQ9Y3I0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26.9■■□□□ 1.9
RTCBQ9Y3I0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC26.9■■□□□ 1.9
RTCBQ9Y3I0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
RTCBQ9Y3I0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RTCBQ9Y3I0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RTCBQ9Y3I0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
RTCBQ9Y3I0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RTCBQ9Y3I0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC26.9■■□□□ 1.9
RTCBQ9Y3I0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RTCBQ9Y3I0 AC061975.6-201ENST00000579045 1553 ntBASIC26.89■■□□□ 1.9
RTCBQ9Y3I0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC26.89■■□□□ 1.9
RTCBQ9Y3I0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC26.89■■□□□ 1.9
RTCBQ9Y3I0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.89■■□□□ 1.9
RTCBQ9Y3I0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
RTCBQ9Y3I0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RTCBQ9Y3I0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
RTCBQ9Y3I0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.89■■□□□ 1.9
RTCBQ9Y3I0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.89■■□□□ 1.89
RTCBQ9Y3I0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
RTCBQ9Y3I0 MME-217ENST00000616757 1315 ntTSL 5 BASIC26.89■■□□□ 1.89
RTCBQ9Y3I0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
RTCBQ9Y3I0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.88■■□□□ 1.89
RTCBQ9Y3I0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC26.88■■□□□ 1.89
RTCBQ9Y3I0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
RTCBQ9Y3I0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RTCBQ9Y3I0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
RTCBQ9Y3I0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RTCBQ9Y3I0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RTCBQ9Y3I0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.88■■□□□ 1.89
RTCBQ9Y3I0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC26.88■■□□□ 1.89
RTCBQ9Y3I0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC26.88■■□□□ 1.89
RTCBQ9Y3I0 AL359736.2-201ENST00000621992 437 ntBASIC26.88■■□□□ 1.89
RTCBQ9Y3I0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC26.88■■□□□ 1.89
RTCBQ9Y3I0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
RTCBQ9Y3I0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RTCBQ9Y3I0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.87■■□□□ 1.89
RTCBQ9Y3I0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC26.87■■□□□ 1.89
RTCBQ9Y3I0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC26.87■■□□□ 1.89
RTCBQ9Y3I0 KRT17P1-201ENST00000399211 1546 ntBASIC26.87■■□□□ 1.89
RTCBQ9Y3I0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.87■■□□□ 1.89
RTCBQ9Y3I0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RTCBQ9Y3I0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC26.87■■□□□ 1.89
RTCBQ9Y3I0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
RTCBQ9Y3I0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC26.87■■□□□ 1.89
RTCBQ9Y3I0 AC008403.3-201ENST00000598924 454 ntBASIC26.87■■□□□ 1.89
RTCBQ9Y3I0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
RTCBQ9Y3I0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RTCBQ9Y3I0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.87■■□□□ 1.89
RTCBQ9Y3I0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.86■■□□□ 1.89
RTCBQ9Y3I0 AC137767.1-201ENST00000602918 1920 ntBASIC26.86■■□□□ 1.89
RTCBQ9Y3I0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RTCBQ9Y3I0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RTCBQ9Y3I0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RTCBQ9Y3I0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
RTCBQ9Y3I0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RTCBQ9Y3I0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC26.86■■□□□ 1.89
RTCBQ9Y3I0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RTCBQ9Y3I0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.86■■□□□ 1.89
RTCBQ9Y3I0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RTCBQ9Y3I0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.85■■□□□ 1.89
RTCBQ9Y3I0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RTCBQ9Y3I0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
RTCBQ9Y3I0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC26.85■■□□□ 1.89
RTCBQ9Y3I0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC26.85■■□□□ 1.89
RTCBQ9Y3I0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RTCBQ9Y3I0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.85■■□□□ 1.89
RTCBQ9Y3I0 AL355472.2-201ENST00000422958 438 ntBASIC26.85■■□□□ 1.89
RTCBQ9Y3I0 NME6-213ENST00000451657 871 ntTSL 2 BASIC26.85■■□□□ 1.89
RTCBQ9Y3I0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
RTCBQ9Y3I0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RTCBQ9Y3I0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms